EST details — SGN-C71922
| Search information |
| Request: 71922 | Match: SGN-C71922 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C71922 | Clone name: cLER-19-J18 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184182 is on microarray TOM1: SGN-S1-1-5.2.16.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184182 [TUS-44-B20] | Trace: SGN-T198358 | EST: SGN-E397032 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184182 [TUS-44-B20] | Trace: SGN-T199989 | EST: SGN-E398663 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E284936 | Length: 597 bp (714 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284936 [] (trimmed)
TGTTTTAAGTTTCAATGAAGGGTGGAAAAGGAAAAGGTGCATTGAGAAAAGAAACAAGGTCGGCGTTGAAGCCTGTTGAGGACCGAAAGATGGGG
AAGAGAAAAGCCACGTTGAAGGACGCCAAAAAGAAGGTCACAAAGGATAAAAAGGCAAAGAAAGATCCCAATAAGCCTAAGAGGCCTCCCAGTGC
CTTTTTCGTATTCCTTGAGGAATTCAGGAAGACATTTAAAAAGGAGAATCCTAATGTGAAGGCTGTTTCTGCTGTCGGGAAAGCTGGAGGAGAAA
AGTGGAAATCTTTGAGTGCAGCTGAAAAATCACCATATGAAGCCAAAGCTGCAAAAAGGAAGGCAGAGTATGGAAAACTCATGAATGCTTATAAC
AATAAGCAGGTGGAAAGCTCAGATGATGAGGACGAAGAAGAAAAAGAAGAAGAAAAAGAGAAAAGGTCAAAGCCTGAGGTACATGATGAAGATGC
GGAGGACAGTGGACAGGGCGAGGAAGAGGACGATGAAGACGAAGAGGATGAAGATGAGGAAGATGATTGAAGCTATGTAATTTCTGGCTTGCACC
GTTTCCTTGGTCCATCACATGCACACT
AAGAGAAAAGCCACGTTGAAGGACGCCAAAAAGAAGGTCACAAAGGATAAAAAGGCAAAGAAAGATCCCAATAAGCCTAAGAGGCCTCCCAGTGC
CTTTTTCGTATTCCTTGAGGAATTCAGGAAGACATTTAAAAAGGAGAATCCTAATGTGAAGGCTGTTTCTGCTGTCGGGAAAGCTGGAGGAGAAA
AGTGGAAATCTTTGAGTGCAGCTGAAAAATCACCATATGAAGCCAAAGCTGCAAAAAGGAAGGCAGAGTATGGAAAACTCATGAATGCTTATAAC
AATAAGCAGGTGGAAAGCTCAGATGATGAGGACGAAGAAGAAAAAGAAGAAGAAAAAGAGAAAAGGTCAAAGCCTGAGGTACATGATGAAGATGC
GGAGGACAGTGGACAGGGCGAGGAAGAGGACGATGAAGACGAAGAGGATGAAGATGAGGAAGATGATTGAAGCTATGTAATTTCTGGCTTGCACC
GTTTCCTTGGTCCATCACATGCACACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E284936] | SGN-U581406 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96508 [Download][View] | Facility Assigned ID: TPRCX57TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.926 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
