EST details — SGN-C72036
| Search information |
| Request: 72036 | Match: SGN-C72036 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72036 | Clone name: cLER-19-P2 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185411 is on microarray TOM1: SGN-S1-1-8.2.10.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185411 [TUS-47-F1] | Trace: SGN-T192318 | EST: SGN-E390992 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185411 [TUS-47-F1] | Trace: SGN-T192319 | EST: SGN-E390993 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285090 | Length: 598 bp (700 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285090 [] (trimmed)
GACACAAACAAAACTGAAACATTGCGAAAATTCTCATTAGCCAGCTGCAGTAATAGTTCTTTACCCAAGACAAAAATCCCTCAAATATCCAAAAA
GTTAAAATGGAACACTATTCAGAAAAACACAAATTTAAGAATAGCAGTGTTGGCAATCCTGGAAAACACCCAATTTAAAACTACACGATAGCGTT
GGCAGCGCTTGCAATCCTGGGCCACAGATCAGCACACTCTTTTCCGATAGGACCAGTAATAGCAGAACCCTTCATTTCACCCTTGGGATTCACAA
TTACACCAGCATTATCTTCAAAGTACATGAAAACACCATCCTTTCGACGCCATGGCTTGCGCTGACGAACAATGACAGCAGGCATAACCTTCTTC
CGCAGATCAGGCTTACCCTTCTTGACAGTGGCCATGACCATGTCACCCACGCAAGCTGAAGGCAACCTGTTAAGCCTTCCCTTGATACCCTTCAC
TGAAATGATGTAAAGGTTCTTTGCACCAGTGTTATCGGCACAGTTAACTGTGGCCGCCACTGGCAAACCCAGTGACATCCTGAACTTGTTCCCAG
CGGAAACCTCCGCGTCCTTTTTTTTTTT
GTTAAAATGGAACACTATTCAGAAAAACACAAATTTAAGAATAGCAGTGTTGGCAATCCTGGAAAACACCCAATTTAAAACTACACGATAGCGTT
GGCAGCGCTTGCAATCCTGGGCCACAGATCAGCACACTCTTTTCCGATAGGACCAGTAATAGCAGAACCCTTCATTTCACCCTTGGGATTCACAA
TTACACCAGCATTATCTTCAAAGTACATGAAAACACCATCCTTTCGACGCCATGGCTTGCGCTGACGAACAATGACAGCAGGCATAACCTTCTTC
CGCAGATCAGGCTTACCCTTCTTGACAGTGGCCATGACCATGTCACCCACGCAAGCTGAAGGCAACCTGTTAAGCCTTCCCTTGATACCCTTCAC
TGAAATGATGTAAAGGTTCTTTGCACCAGTGTTATCGGCACAGTTAACTGTGGCCGCCACTGGCAAACCCAGTGACATCCTGAACTTGTTCCCAG
CGGAAACCTCCGCGTCCTTTTTTTTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285090] | SGN-U580720 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96662 [Download][View] | Facility Assigned ID: TPRCX85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |
Working
