EST details — SGN-C72044
| Search information |
| Request: 72044 | Match: SGN-C72044 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72044 | Clone name: cLER-19-P8 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185412 is on microarray TOM1: SGN-S1-1-7.2.10.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185412 [TUS-47-F2] | Trace: SGN-T192658 | EST: SGN-E391332 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185412 [TUS-47-F2] | Trace: SGN-T197688 | EST: SGN-E396362 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285092 | Length: 548 bp (695 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285092 [] (trimmed)
GGATGATGAGCCTCTCCATTGCCACTCCTCCTTCAAGTGTTAACTTTGCTTCCAAGTTAAACCTCTCTAAATCCTCCTTCCATGGCGTTCGAATT
GCTCAAGTCTGTCCGGTTCATGCTCGAAGCGCGCATTCTATAGCGACCACTCGCTCTTCTTCATTAATGGTGGTGAATATGGCGAAGAGAGATGA
CGAATTGAAGGAAATTCGAACCAAAACTACTGAGGAGCTTCAGGAAGAGATTGTTGACCTTAAAGGAGAGCTCTTCATGCTTCGTCTTCAAAGAT
CAGCTCGTAATGAGTTTAAGTCAAGCGAGTTTCTTCGGATGCGTAAAAGGATTGCTCGAATGCTTACTGTTAAACGGGAGCGTGAGATGGAAGAA
GGAATTAACAAAAGGATATCCAGGAAGCTTGATCGGAAATGGAAGAAAAGCATTGTTCCTAGACCACCTCCTTCTTTGAAGAAGTTGCGAGAGGA
AGAGGCAGCTGAAGAGGCTAAGGAATCTGCCTGATGTTAACACATTTTCATTGGTAAATGTCATATTTTCATC
GCTCAAGTCTGTCCGGTTCATGCTCGAAGCGCGCATTCTATAGCGACCACTCGCTCTTCTTCATTAATGGTGGTGAATATGGCGAAGAGAGATGA
CGAATTGAAGGAAATTCGAACCAAAACTACTGAGGAGCTTCAGGAAGAGATTGTTGACCTTAAAGGAGAGCTCTTCATGCTTCGTCTTCAAAGAT
CAGCTCGTAATGAGTTTAAGTCAAGCGAGTTTCTTCGGATGCGTAAAAGGATTGCTCGAATGCTTACTGTTAAACGGGAGCGTGAGATGGAAGAA
GGAATTAACAAAAGGATATCCAGGAAGCTTGATCGGAAATGGAAGAAAAGCATTGTTCCTAGACCACCTCCTTCTTTGAAGAAGTTGCGAGAGGA
AGAGGCAGCTGAAGAGGCTAAGGAATCTGCCTGATGTTAACACATTTTCATTGGTAAATGTCATATTTTCATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285092] | SGN-U571374 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96664 [Download][View] | Facility Assigned ID: TPRCX88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |
Working
