EST details — SGN-C72066

Search information 
Request: 72066Match: SGN-C72066
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72066Clone name: cLER-1-B10
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178439 is on microarray TOM1: SGN-S1-1-4.3.4.17
See unigene SGN-U583757 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C178439 [TUS-29-C13] Trace: SGN-T183822 EST: SGN-E370481 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E280626Length: 489 bp (798 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E280626 [] (trimmed) TTTTGCTGCAGCGGCGAAAATGGCGAACCCGGAGGAGGCTGTGGATTTCGAGCCAGAGGAAGACGATCTGATGGACGAAGACGTTGACGCTTCAT
CACCTAGGGCACCGATGCCAAAGCTGAAATCAGCCATTACAGGTGGCGGCGGCGGTTCTTCTGCTTCTAAGAAAATCAAAGGACGGGGTTTCCGT
GAAGAGACTGCTGAGGCTGAAAGGAATGCTCGCCTTTCTGCTCGATTTGATTCACTTGACTCCGAAGGTGGCCCTGGACCTGAACGATCCATTGA
AGGATGGATTATTTTAGTCACTGGAGTCAATGAGGAGGCACAAGAAGATGATCTTCATAATACATTTGGTGAGTTCGGGGAGATCAAGAATTTGC
ATTTGAATCTGGATCGTCGTTCTGGATTTGTCAAGGGTTATGCACTTATTGAATATGAAAACTTTGAAGAAGCAGAGAGAGCTATTAGTGAAATG
GATGGGAATGAGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280626] SGN-U583757 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92180 [Download][View] Facility Assigned ID: TPRAD05TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0105 Quality Trim Threshold: 14.5