EST details — SGN-C72111

Search information 
Request: 72111Match: SGN-C72111
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72111Clone name: cLER-1-D12
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184997 is on microarray TOM1: SGN-S1-1-6.4.12.21
See unigene SGN-U565998 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C184997 [TUS-46-D19] Trace: SGN-T199023 EST: SGN-E397697 Direction: 5' Facility: INRA
Clone: SGN-C184997 [TUS-46-D19] Trace: SGN-T199085 EST: SGN-E397759 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E280630Length: 493 bp (812 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280630 [] (trimmed) TAACACAGAGCAAATAAAAATGGCGTCCATAGCCGGTGTTAGTATAACAATCCCAACAATTTCATCCGATTCACCCAAAATTCAGCCCTTGAAAT
TGCAAACCCTAAACAGCCCATGGAAGAAATCAAGTCAATTGGGTTACAGGAGGATGATGTATGTAGTGGTACCCAGAGTAGTTCCGGATAAGAAG
CTATCTGATTTAGTTGCGGAAAGTGTTAAAGAAGCTGAAGAAACTTGTGCGGAGGATCCGGTGAGCGGCGAGTGTAAGGCGGCATGGGATGTGGT
GGAAGAGACGAGTGCAGCAGCGAGCCATGCGAGGGATAAGAAGAAGGAATCAGATGTACTGGAGAATTATTGCAAGGATAATCCAGAAACTGATG
AATGCCGCACTTACGATAATTAATTATGATGATGATTAGTAGCAGCTACTCATGTCATGTCTTGTGTTCTTTTCAAATGGTAATCTGTTTTATCA
AAACTTAAATCTTCTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280630] SGN-U565998 Tomato 200607 Build 2 50 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92184 [Download][View] Facility Assigned ID: TPRAD18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0102 Quality Trim Threshold: 12.5