EST details — SGN-C72120

Search information 
Request: 72120Match: SGN-C72120
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72120Clone name: cLER-1-D21
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178486 is on microarray TOM1: SGN-S1-1-5.1.4.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178486 [TUS-29-E12] Trace: SGN-T183903 EST: SGN-E371574 Direction: 3' Facility: INRA
Clone: SGN-C178486 [TUS-29-E12] Trace: SGN-T183904 EST: SGN-E371575 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280590Length: 416 bp (726 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280590 [] (trimmed) TTTTTTGATAACCTTAGACATGATATACAATCAAACACGCCGCTGCAAAATTTACCTCAGTTTGAAGTCTTTACACTGTAGAGTTCACTGTAGGA
ACAAGCTTCAGCTAGAAGCATTCCAAGATTTTAGATATTTTACATATGAAGTAGACAAACCATGCGATGAATCAAATAATTGTTTTAGTACACAT
ATGCTTACCCAGAGACTGTAGCAAACTAAAAGAGCAGCAGCGTCCAATCTTGTAAAAATGGCAGCTAAGACAGTCTGATTGCCATTTCTTGAAGC
AGTGCCCGCTTTTGTAATGTATTAATTACTTTATTGGATTCTGCATTTTCAAGCACATCTGCAATTATGGCTGCTGCATGGCCCAGAGGTTCTTC
TGCTGCTCTCTTCAGCATAAAGGCCTGTCCATGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280590] SGN-U566873 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92144 [Download][View] Facility Assigned ID: TPRAC23TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0085 Quality Trim Threshold: 14.5