EST details — SGN-C72147
| Search information |
| Request: 72147 | Match: SGN-C72147 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72147 | Clone name: cLER-1-E7 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184265 is on microarray TOM1: SGN-S1-1-2.2.16.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184265 [TUS-44-F7] | Trace: SGN-T198268 | EST: SGN-E396942 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184265 [TUS-44-F7] | Trace: SGN-T199974 | EST: SGN-E398648 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280280 | Length: 537 bp (814 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280280 [] (trimmed)
ATGAACTTTGTTGTGGATTTAACTTGCACAGAGACCAAATATGATTTGATTTGGGTACATAGCTTATTATAGAGACATGCTCACAACTCTTAACA
TCAAGTCCTCCATCAAATTTGATAATACCATCACAAACAGTTGTCAAAGACATGTATACTATGTATCGAGAACAACAAATATGGAACTAGAACGA
GAAGGATTATCAATCTCTTCTTTAATGTTCTCCCTGATAGATTATTCGAACACCACGAAGTAGACAATGGGAAAATGTTACATGGGTCGAGTGTT
CCCAAGAAGCGTCCCCACAAGGTTAGTCACCTGCCAGTACTTTGAAACGCATCGGTCAATACAACTATTTTCACCCATGTTCAACTCCGAGTCCT
TGTACTTGTTCTCGACGCATTTTTTGAAGCATGTATGCGTAAGCTTGTTAAACATCTGCACTCTATACTCCATCTCTTTCTCTGCCATAGAGAAT
ATCTGGTCTCTTTCAAGGTTAGAAGGAACACCAGCCATTATAACCTTTTCAAGAATGGAAAA
TCAAGTCCTCCATCAAATTTGATAATACCATCACAAACAGTTGTCAAAGACATGTATACTATGTATCGAGAACAACAAATATGGAACTAGAACGA
GAAGGATTATCAATCTCTTCTTTAATGTTCTCCCTGATAGATTATTCGAACACCACGAAGTAGACAATGGGAAAATGTTACATGGGTCGAGTGTT
CCCAAGAAGCGTCCCCACAAGGTTAGTCACCTGCCAGTACTTTGAAACGCATCGGTCAATACAACTATTTTCACCCATGTTCAACTCCGAGTCCT
TGTACTTGTTCTCGACGCATTTTTTGAAGCATGTATGCGTAAGCTTGTTAAACATCTGCACTCTATACTCCATCTCTTTCTCTGCCATAGAGAAT
ATCTGGTCTCTTTCAAGGTTAGAAGGAACACCAGCCATTATAACCTTTTCAAGAATGGAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280280] | SGN-U582918 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91834 [Download][View] | Facility Assigned ID: TPRAA28TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 14.5 |
Working
