EST details — SGN-C72318

Search information 
Request: 72318Match: SGN-C72318
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72318Clone name: cLER-1-N12
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178648 is on microarray TOM1: SGN-S1-1-3.4.4.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178648 [TUS-29-L6] Trace: SGN-T184214 EST: SGN-E371447 Direction: 3' Facility: INRA
Clone: SGN-C178648 [TUS-29-L6] Trace: SGN-T184215 EST: SGN-E371448 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280651Length: 431 bp (826 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280651 [] (trimmed) AGAAATGAGGTTCACCCAATTACTAGAATAGAGTTGACAAGTTAATACGTATTTTACTTCAGCCAGTGCATCTATTTTTCCCCCAATTCCCTTAA
CAGCGCCGATATCAATCAATCTTCTCCCATTCTCTGTGAGCTCGAGCTCCGCTGAGAACGAAGATGCAGGCCATCACGAGAAAACTAGGGCACCA
ATCTTTGAAACATCATTCGCCTGCCATTTCATCATTCAAGTCTCTCTATCCTCTTTCTGATGATCACTACTATGGTTATCTTACTCCGCGCTACG
CATCTAACCTTGCCACCGGGGGTGCGGGACCTCTAATTCGTAAGGGAACTGGAGGAAGATCATCCGTTAGTGGAATCGTCGCTACAGTCTTTGGA
GCTACTGGATTTCTGGGGCGTTATGTTGTACAACAGCTTGCTAAAATGGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280651] SGN-U586248 Tomato 200607 Build 2 58 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92205 [Download][View] Facility Assigned ID: TPRAD78TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5