EST details — SGN-C72377

Search information 
Request: 72377Match: SGN-C72377
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72377Clone name: cLER-1-P4
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178695 is on microarray TOM1: SGN-S1-1-4.2.4.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178695 [TUS-29-N5] Trace: SGN-T184082 EST: SGN-E371013 Direction: 3' Facility: INRA
Clone: SGN-C178695 [TUS-29-N5] Trace: SGN-T184083 EST: SGN-E371014 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280457Length: 406 bp (813 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280457 [] (trimmed) CGATTTAATACTGAACGTATTATAAAAGTAAAAAAAATTGTTTGCAAAAGATTCAATTTTGAACTGATTAATGCAATCAAAACAAACACAAATCA
AACATTGTTTCCTCAAACTAAACTTCATAAATCACAAACACATATTCTAGAGCAAATATATGTTGCATCACTTATCTCCATTTGCATCCCCTCAG
TATTAGTTGGTAGATTGCTGCAATAAGTGCTCCTGTGAAAGGTCCTCCAGAAAAGATCCCAAGGTCCTCCCATGCTATTTGTTGATTGTAGATGA
CAGCAGCTCCAAGACTTCTAGCAGGGTTGATCCCTGTGCCAGTAATTGGGATTGTGGCCAAGTGGACCAAAAACACAGCAAATCCAATTGGTAGA
GGGGCCAACACAGGAACATGTGAGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280457] SGN-U577606 Tomato 200607 Build 2 158 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92011 [Download][View] Facility Assigned ID: TPRAD86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5