EST details — SGN-C72984
| Search information |
| Request: 72984 | Match: SGN-C72984 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72984 | Clone name: cLER-2-M22 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183481 is on microarray TOM1: SGN-S1-1-2.1.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183481 [TUS-42-E15] | Trace: SGN-T194926 | EST: SGN-E393600 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183481 [TUS-42-E15] | Trace: SGN-T194927 | EST: SGN-E393601 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183481 [TUS-42-E15] | Trace: SGN-T195482 | EST: SGN-E394156 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E278778 | Length: 546 bp (729 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E278778 [] (trimmed)
ACACAGAAGGAATGGTCTCTTTTGCTTCAACACTTCCCTCTTTGGTTTCATTCATTCCTTCACCATCTTCCATTACCAATGCCTCAAGAAACCCT
CCTCAACCTGGTATGATTTGTTGTAAGTTTAGATCAGAGCTTAATAATGAAGATCGCTTTCATAGACGTGATATTCTTCAATCTGTTGGAGCAGC
AGTAGGCATGGACTTGATAGCAAGATCGAGTGCATTCATCGAAGTAGCTAATGCTGCTGATTTAATACAACGCAGACAGCGGTCAGATTTTCAAT
CAAAGATCAAACTGACTCTTTATGATGCTATAAAGGCAAATCCGGATATAATTCCATCCTTACTAACTTTAGCACTTAACGATGCCATAACATAT
GATAAGGCAACAAAAACCGGGGGTCCCAATGGATCCATACGTTTCAGCTCAGAGATCAGCAGACCAGAAAATAAGGGGCTTGATGCTGCTTTGAA
TTTGCTGGAGGAATCAAAGAAGGTTATTGATTTAGATTCCAAAGGTGGACCAATCTCATATGCAGATCTCA
CCTCAACCTGGTATGATTTGTTGTAAGTTTAGATCAGAGCTTAATAATGAAGATCGCTTTCATAGACGTGATATTCTTCAATCTGTTGGAGCAGC
AGTAGGCATGGACTTGATAGCAAGATCGAGTGCATTCATCGAAGTAGCTAATGCTGCTGATTTAATACAACGCAGACAGCGGTCAGATTTTCAAT
CAAAGATCAAACTGACTCTTTATGATGCTATAAAGGCAAATCCGGATATAATTCCATCCTTACTAACTTTAGCACTTAACGATGCCATAACATAT
GATAAGGCAACAAAAACCGGGGGTCCCAATGGATCCATACGTTTCAGCTCAGAGATCAGCAGACCAGAAAATAAGGGGCTTGATGCTGCTTTGAA
TTTGCTGGAGGAATCAAAGAAGGTTATTGATTTAGATTCCAAAGGTGGACCAATCTCATATGCAGATCTCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E278778] | SGN-U577581 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92496 [Download][View] | Facility Assigned ID: TPRAF83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
