EST details — SGN-C73102
| Search information |
| Request: 73102 | Match: SGN-C73102 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C73102 | Clone name: cLER-3-E16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185091 is on microarray TOM1: SGN-S1-1-8.4.11.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185091 [TUS-46-H17] | Trace: SGN-T199036 | EST: SGN-E397710 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185091 [TUS-46-H17] | Trace: SGN-T200109 | EST: SGN-E398783 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E277472 | Length: 279 bp (792 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E277472 [] (trimmed)
TACCACTATAGCTGTGTGCCTTGTCCTGAATTTCGCAAGGGTGCATGCCGACGCGGTGATATGTGCGAATATGCTCATGGGGTGTTTGAGTGCTG
GCTACACCCTGCTCAGTATCGTACCCCTCTGTGCAAGGATGGCACAAGCTGAGCTAGACGAATCTGATTTTTTGCCCATACTACGGAGGAGCTTA
AGCCCTTGTGTGTCTGTACTGGATCTGCAGTCCCATCTCCTCAGTCAGCTGCTTCTGCAGCTAGTGTGATGGACATGGATGCACCGCTG
GCTACACCCTGCTCAGTATCGTACCCCTCTGTGCAAGGATGGCACAAGCTGAGCTAGACGAATCTGATTTTTTGCCCATACTACGGAGGAGCTTA
AGCCCTTGTGTGTCTGTACTGGATCTGCAGTCCCATCTCCTCAGTCAGCTGCTTCTGCAGCTAGTGTGATGGACATGGATGCACCGCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E277472] | SGN-U566806 | Tomato 200607 | Build 2 | 58 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92360 [Download][View] | Facility Assigned ID: TPRAJ32THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0225 | Quality Trim Threshold: 14.5 |
Working
