EST details — SGN-C73539

Search information 
Request: 73539Match: SGN-C73539
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C73539Clone name: cLER-5-D19
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184323 is on microarray TOM1: SGN-S1-1-8.4.16.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184323 [TUS-44-H17] Trace: SGN-T199978 EST: SGN-E398652 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E279543Length: 440 bp (862 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E279543 [] (trimmed) CCGATGATGGGCCATAACTCGGGCTATGGTACGGGCCATAACGGTACTTCTCATGGGATGCTACCATGTTGATGGCCATGGCTAGAGCCGTAGCC
CATCATTCCAGGTTTGGTTTCGTAACACTTTTCTTTCTCATAGTAAGATTGTTCATATCCAGGAATGTTGAAGCAATTTGTCGTTGCTGAACCTG
AGATCCAGGATCAAGAGATTGATGAGGAAGTAGAACTTCTCGTGCTTGCCAGTGATGGACTTTGGGATGTTGTACCAAATGAGGATGCTATTTCA
CTGGCTCAAGCAGAAGAAGAGCCAGAAGCAGCTGCTAGGAAGCTGACGGAAACTGCGTTTACTCGGGGTAGTGCTGATAATATTACTTGCATAGT
GGTGAGGTTTAATCATAAGAAGGCTGAAGCGGAGGGGAGCCCGCAAGGCTGAAGAATTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E279543] SGN-U563311 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T93052 [Download][View] Facility Assigned ID: TPRAS22TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0101 Quality Trim Threshold: 14.5