EST details — SGN-C73644
| Search information |
| Request: 73644 | Match: SGN-C73644 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C73644 | Clone name: cLER-5-J1 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185327 is on microarray TOM1: SGN-S1-1-4.2.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185327 [TUS-47-B13] | Trace: SGN-T192225 | EST: SGN-E390899 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185327 [TUS-47-B13] | Trace: SGN-T192226 | EST: SGN-E390900 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E279702 | Length: 524 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279702 [] (trimmed)
CTCCCGTTTTCGCTCTGAGAATCAGCAAAAATGCAGAAGCAAGAAGCAGCCGCAGCTACGGTGGAATCCGTCCAATGCTTCGGGAGGAAGAAGAC
GGCAGTGGCGGTGACTCACTGCAAGCGTGGGCGTGGTTTGATCAAGATTAACGGTGTCCCAATCGAGCTTGTTCAGCCGGAGATCCTCCGGTACA
AGGCCTTTGAACCAATCCTTCTCTTAGGACGTCATCGTTTCGCCGGAGTTGACATGCGTATCCGTGTGAAGGGAGGTGGTCACACTTCTCAGATC
TACGCTATCCGTCAGTCAATTGCAAAGGCACTTGTTGCGTTTTACCAGAAGTTTGTGGATGAGCAGCAGAAGAAGGAGATTAAGGATATTCTCAT
TCGCTATGATAGGACTCTCCTTGTTGCTGATCCTAGGCGTTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGTTCTAGGTTCCAGAAATCTT
ACCGTTGATTTCAATCTTCAATACTATGGATTACCATTTACGGTAATTG
GGCAGTGGCGGTGACTCACTGCAAGCGTGGGCGTGGTTTGATCAAGATTAACGGTGTCCCAATCGAGCTTGTTCAGCCGGAGATCCTCCGGTACA
AGGCCTTTGAACCAATCCTTCTCTTAGGACGTCATCGTTTCGCCGGAGTTGACATGCGTATCCGTGTGAAGGGAGGTGGTCACACTTCTCAGATC
TACGCTATCCGTCAGTCAATTGCAAAGGCACTTGTTGCGTTTTACCAGAAGTTTGTGGATGAGCAGCAGAAGAAGGAGATTAAGGATATTCTCAT
TCGCTATGATAGGACTCTCCTTGTTGCTGATCCTAGGCGTTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGTTCTAGGTTCCAGAAATCTT
ACCGTTGATTTCAATCTTCAATACTATGGATTACCATTTACGGTAATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279702] | SGN-U580874 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93211 [Download][View] | Facility Assigned ID: TPRAS49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 12.5 |
Working
