EST details — SGN-C73721
| Search information |
| Request: 73721 | Match: SGN-C73721 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C73721 | Clone name: cLER-5-N13 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183393 is on microarray TOM1: SGN-S1-1-2.1.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183393 [TUS-42-A23] | Trace: SGN-T194910 | EST: SGN-E393584 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183393 [TUS-42-A23] | Trace: SGN-T194911 | EST: SGN-E393585 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183393 [TUS-42-A23] | Trace: SGN-T200230 | EST: SGN-E399127 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E279557 | Length: 437 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279557 [] (trimmed)
CAGAAACCTGGTTCTGCTACTCTTCCTTTCTTTGGAGTCCAGCCAGTAATAGTGGATGAGAAAGGTGTTGAGATTGAAGGTGAGTGCAGTGGGTA
TCTGTGTGTGAAAAGCTCGTGGCCTGGGGCATTCCGAACACTTCATGGGGATCATGAGAGATATGAAACCACATATTTTAGTACCTTCCCTGGAT
ATTATTTCAGTGGTGATGGCTGCAGCAGGGACAAAGATGGTTACTACTGGCTCACTGGAAGAGTAGATGATGTGATTAATGTGAGTGGACATCGT
ATTGGCACAGCCGAAGTGGAATCTGCTCTAGTTTCACATCCTCAGTGTGCTGAAGCTGCTGTGGTTGGTGTGGAGCATGAGGTTAAAGGACAGGG
AATATATGCATTTGTTACTATAGTCGAAGGTGTTCCATACAGCGATGACCTGCGAAA
TCTGTGTGTGAAAAGCTCGTGGCCTGGGGCATTCCGAACACTTCATGGGGATCATGAGAGATATGAAACCACATATTTTAGTACCTTCCCTGGAT
ATTATTTCAGTGGTGATGGCTGCAGCAGGGACAAAGATGGTTACTACTGGCTCACTGGAAGAGTAGATGATGTGATTAATGTGAGTGGACATCGT
ATTGGCACAGCCGAAGTGGAATCTGCTCTAGTTTCACATCCTCAGTGTGCTGAAGCTGCTGTGGTTGGTGTGGAGCATGAGGTTAAAGGACAGGG
AATATATGCATTTGTTACTATAGTCGAAGGTGTTCCATACAGCGATGACCTGCGAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279557] | SGN-U569172 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93066 [Download][View] | Facility Assigned ID: TPRAS79TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 14.5 |
Working
