EST details — SGN-C74824
| Search information |
| Request: 74824 | Match: SGN-C74824 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C74824 | Clone name: cLES-11-K11 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185638 is on microarray TOM1: SGN-S1-1-5.3.9.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185638 [TUS-47-O12] | Trace: SGN-T191979 | EST: SGN-E390653 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185638 [TUS-47-O12] | Trace: SGN-T192213 | EST: SGN-E390887 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286325 | Length: 614 bp (840 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286325 [] (trimmed)
TTTAGCTCTCTAATGGATCCTTACAAGTACCGTCCGTCAAGTGCTTTCAATTCACCTTTCTGTACCACTAATTCTGGTGCTCCTGTTTTTAATAA
CAATTCATCTCTTACGGTTGGTGCAAGAGGTCCTGTGTTGCTTGAGGATTACCATTTGGTGGAGAAACTTGCCAACTTTGACAGGGAACGTATTG
CAGAACGTGTTGTTCATGCCCGAGGTGCTAGTGCCAAAGGGTTTTTTGAAGTTACTCATGACATTGCTCACCTTACCTGTGCTGATTTCCTTCGA
GCTCCTGGTGTACAGACTCCAGTCATTGTGAGATTCTCTACTGTTATTCATGAAAGGGGTAGTCCTGAAACTCTGAGGGATCCTCGTGGTTTTGC
TGTCAAGTTTTACACCAGAGAGGGAAACTTTGATCTGGTAGGGAACAACTTCCCCGTCTTCTTCATCCGTGATGGAATGAAGTTCCCTGACATGG
TCCATGCTCTGAAGCCAAATCCTAAGTCCCATATCCAGGAGAATTGGAGGGTCCTTGATTTTTTCTCTCATCATCCCGAAAGCCTGCACATGTTC
ACTTTCCTCTTCGACGATATTGGTATTCCACAAGATTACAGGCA
CAATTCATCTCTTACGGTTGGTGCAAGAGGTCCTGTGTTGCTTGAGGATTACCATTTGGTGGAGAAACTTGCCAACTTTGACAGGGAACGTATTG
CAGAACGTGTTGTTCATGCCCGAGGTGCTAGTGCCAAAGGGTTTTTTGAAGTTACTCATGACATTGCTCACCTTACCTGTGCTGATTTCCTTCGA
GCTCCTGGTGTACAGACTCCAGTCATTGTGAGATTCTCTACTGTTATTCATGAAAGGGGTAGTCCTGAAACTCTGAGGGATCCTCGTGGTTTTGC
TGTCAAGTTTTACACCAGAGAGGGAAACTTTGATCTGGTAGGGAACAACTTCCCCGTCTTCTTCATCCGTGATGGAATGAAGTTCCCTGACATGG
TCCATGCTCTGAAGCCAAATCCTAAGTCCCATATCCAGGAGAATTGGAGGGTCCTTGATTTTTTCTCTCATCATCCCGAAAGCCTGCACATGTTC
ACTTTCCTCTTCGACGATATTGGTATTCCACAAGATTACAGGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286325] | SGN-U578479 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T99856 [Download][View] | Facility Assigned ID: TPSBO66TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
