EST details — SGN-C76115
| Search information |
| Request: 76115 | Match: SGN-C76115 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C76115 | Clone name: cLES-16-P15 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185548 is on microarray TOM1: SGN-S1-1-7.3.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185548 [TUS-47-K18] | Trace: SGN-T191965 | EST: SGN-E390639 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185548 [TUS-47-K18] | Trace: SGN-T192200 | EST: SGN-E390874 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E288420 | Length: 512 bp (962 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288420 [] (trimmed)
CAAAAATCAAGAACCGAACCTCTCAAAAAAAGATTTGTTTTTTTTACAACTGCAAAATCCCAAGTTGAAGAAGAAGAAGCCATGGCCAACATGAT
GATGAGCTCCTCCAAAGTTTTAATCACTTCTTCATCCTCCACCATCCCTCCATCACCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAA
AACTACCCCTCCCCAAATCACCCAAATCCCTTGAAACCCTTTCAATCCCATCAACTCTCAAGTCCATTTCTGTCATTCTTGCAAGCTCATTGGCC
ATGGCACCACCTTCGCTAGCAGAGGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTCCCAATCATGATGGCTGAATTCCTCTTTCT
CATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCCATTAAGGAGAAATTGAGCAGTGTGAAGG
ACACCTCTGCTTGAGTGAAGCAACTGGAAGACCAAGC
GATGAGCTCCTCCAAAGTTTTAATCACTTCTTCATCCTCCACCATCCCTCCATCACCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAA
AACTACCCCTCCCCAAATCACCCAAATCCCTTGAAACCCTTTCAATCCCATCAACTCTCAAGTCCATTTCTGTCATTCTTGCAAGCTCATTGGCC
ATGGCACCACCTTCGCTAGCAGAGGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTCCCAATCATGATGGCTGAATTCCTCTTTCT
CATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCCATTAAGGAGAAATTGAGCAGTGTGAAGG
ACACCTCTGCTTGAGTGAAGCAACTGGAAGACCAAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E288420] | SGN-U579241 | Tomato 200607 | Build 2 | 63 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101146 [Download][View] | Facility Assigned ID: TPSCK92TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.931 | Expected Error Rate: 0.0115 | Quality Trim Threshold: 14.5 |
Working
