EST details — SGN-C76539
| Search information |
| Request: 76539 | Match: SGN-C76539 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C76539 | Clone name: cLES-18-F19 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179160 is on microarray TOM1: SGN-S1-1-3.1.2.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179160 [TUS-31-A14] | Trace: SGN-T185261 | EST: SGN-E373819 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179160 [TUS-31-A14] | Trace: SGN-T185262 | EST: SGN-E373820 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289293 | Length: 617 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289293 [] (trimmed)
AATGGATTTGAGGTTGATGGGTATTGATAACACACCACTCTTCCACACTCTTCAGCATATGATGGAAGCTGCTGGTGAAGATTCCGTGAATGCAC
CATCAAAGAAGTATGTTCGTGATGCTAAGGCAATGGCTGCGACACCAGTGGACGTGAAAGAGTATCCTGATTCATATGTTTTCGTTGTGGATATG
CCAGGGTTGAAATCTGGAGATATCAAAGTGCAGGTAGAAGAAGACAATGTGCTGTTGATTAGTGGTGAAAGGAAGAGGGAAGAAGAGAAAGAAGG
TGTAAAGTTTATTAGAATGGAGAGAAGGGTTGGGAAATTCATGAGGAAGTTTAGTCTGCCGGAGAATGCGAATACTGATGCAATTTCTGCAGTTT
GTCAAGATGGAGTTCTGACTGTTACTGTTCAGAAGCTGCCTCCTCCTGAGCCAAAGAAGTCCAAAACCATTCAGGTCAAAGTTGCTTGAAAATAT
AAAGTTACTCTGTTTTCTTGCTCTGTTTTGATGTAATAAAGCAATTGCTGCTCTAGATTACCATATTTTGATGCATCCAAGGATTAACAAAATAC
AAATTTTAATGCATGTATCTTGTTTGATAAAGAATCGAATTTTAATT
CATCAAAGAAGTATGTTCGTGATGCTAAGGCAATGGCTGCGACACCAGTGGACGTGAAAGAGTATCCTGATTCATATGTTTTCGTTGTGGATATG
CCAGGGTTGAAATCTGGAGATATCAAAGTGCAGGTAGAAGAAGACAATGTGCTGTTGATTAGTGGTGAAAGGAAGAGGGAAGAAGAGAAAGAAGG
TGTAAAGTTTATTAGAATGGAGAGAAGGGTTGGGAAATTCATGAGGAAGTTTAGTCTGCCGGAGAATGCGAATACTGATGCAATTTCTGCAGTTT
GTCAAGATGGAGTTCTGACTGTTACTGTTCAGAAGCTGCCTCCTCCTGAGCCAAAGAAGTCCAAAACCATTCAGGTCAAAGTTGCTTGAAAATAT
AAAGTTACTCTGTTTTCTTGCTCTGTTTTGATGTAATAAAGCAATTGCTGCTCTAGATTACCATATTTTGATGCATCCAAGGATTAACAAAATAC
AAATTTTAATGCATGTATCTTGTTTGATAAAGAATCGAATTTTAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289293] | SGN-U579132 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101735 [Download][View] | Facility Assigned ID: TPSCS34TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 12.5 |
Working
