EST details — SGN-C76588
| Search information |
| Request: 76588 | Match: SGN-C76588 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C76588 | Clone name: cLES-18-H8 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179174 is on microarray TOM1: SGN-S1-1-5.2.2.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179174 [TUS-31-B4] | Trace: SGN-T185529 | EST: SGN-E373391 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179174 [TUS-31-B4] | Trace: SGN-T185530 | EST: SGN-E373392 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289339 | Length: 580 bp (955 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289339 [] (trimmed)
CTTCGCGCAACTTAAACAGAGAATCGTAGAGGTTATCACGCGACAAGCTGCTGTACAAAGGTGCAATGCAACAGTTGATTTTGACACAAAAAACA
GGCCGTTTTACCCTGTGACAGTGAATAATAAAGCTTTGCATGAACAATTCCGAAATGTAGCTGGACAGATGCTTGGTATCGACAAGATCATAGCA
ATGAAACCAACGATGGGGACAGAAGATTTTTCGTTCTTTGCTGAGGCTATTCCTGGATGCTTTTACTTACTTGGAATGGTTGATGAAACTAAAGG
ACGATTCGAGTCAGGACACTCCCCTTTCTACAGAGTCAATGAAGATGTACTTCCATATGGTGTTGCTTTACATGCATCGTTAGCCACGACTTACC
TTCTTGAACATCAGTTGAAATCAACCACTCGAGATCAAAATGTTCATGACGAGTTGTAAGGTCTTATGAGAGACCTTGCGGATGAAAATAATTTC
TGCTACATGCAATCGAGCAGAAGTAGGTTCCTCTCTTTCTATTTACTTGATATCTAAACTTATTCCAAATCAAGTTGGGTGTTAGAGCTAGTTTG
GTTGATCATG
GGCCGTTTTACCCTGTGACAGTGAATAATAAAGCTTTGCATGAACAATTCCGAAATGTAGCTGGACAGATGCTTGGTATCGACAAGATCATAGCA
ATGAAACCAACGATGGGGACAGAAGATTTTTCGTTCTTTGCTGAGGCTATTCCTGGATGCTTTTACTTACTTGGAATGGTTGATGAAACTAAAGG
ACGATTCGAGTCAGGACACTCCCCTTTCTACAGAGTCAATGAAGATGTACTTCCATATGGTGTTGCTTTACATGCATCGTTAGCCACGACTTACC
TTCTTGAACATCAGTTGAAATCAACCACTCGAGATCAAAATGTTCATGACGAGTTGTAAGGTCTTATGAGAGACCTTGCGGATGAAAATAATTTC
TGCTACATGCAATCGAGCAGAAGTAGGTTCCTCTCTTTCTATTTACTTGATATCTAAACTTATTCCAAATCAAGTTGGGTGTTAGAGCTAGTTTG
GTTGATCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289339] | SGN-U563896 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101781 [Download][View] | Facility Assigned ID: TPSCT40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0107 | Quality Trim Threshold: 12.5 |
Working
