EST details — SGN-C76607
| Search information |
| Request: 76607 | Match: SGN-C76607 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C76607 | Clone name: cLES-18-J10 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179179 is on microarray TOM1: SGN-S1-1-8.2.2.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179179 [TUS-31-B9] | Trace: SGN-T185354 | EST: SGN-E373216 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179179 [TUS-31-B9] | Trace: SGN-T185355 | EST: SGN-E373217 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289185 | Length: 579 bp (959 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289185 [] (trimmed)
GCTACTCAGGCTGAAAAGGAGGAGGTGGATTCGCGATCCATATATGTTGGTAATGGTAACTATCCTGACTGACAAGCTTGGCCAGCCGAAAGGCT
TTGCGTATGTGGAGTTCTTTGAAAGGGAGGCTGTTCAAAATGCACTTCTGTTAAACGAATCAGAGCTTCACGGGCGGAAGTTGAAGGTGTCTGCC
AAGCGGACAAATGTTCCTGGTATGAAGCAATTTCGAGGAAGGCGATTTAATCCTTATGCTGGATTCCGCCCTCGACGTGCGTTTGTGCCTGGTGC
TCCAGCCATTCCACCATTTGGAAGGGTTCCAAGGTTCAGACGGTCCATCCGCTACAGGCCATACTAGTGAATTTTAAGCTGGATTGCAGCCTTCC
CTAGAGAAGCATGGAGCTCGCTTTGTGAAAAGGGCATCTCCTTGTTTTACTCTCTTTGGTTGAGGGCAAAGGATGTTCTAATTCAAATAAGTCAT
TAGCTGACATAAATTTCAACTCTGTGGATGATGTTTTAGGTTCTGGGGATTGAGAATTTTTTTCTTTGCTAGCTTGCTCAGATGCTTGCATTTTG
GGCAGCAAA
TTGCGTATGTGGAGTTCTTTGAAAGGGAGGCTGTTCAAAATGCACTTCTGTTAAACGAATCAGAGCTTCACGGGCGGAAGTTGAAGGTGTCTGCC
AAGCGGACAAATGTTCCTGGTATGAAGCAATTTCGAGGAAGGCGATTTAATCCTTATGCTGGATTCCGCCCTCGACGTGCGTTTGTGCCTGGTGC
TCCAGCCATTCCACCATTTGGAAGGGTTCCAAGGTTCAGACGGTCCATCCGCTACAGGCCATACTAGTGAATTTTAAGCTGGATTGCAGCCTTCC
CTAGAGAAGCATGGAGCTCGCTTTGTGAAAAGGGCATCTCCTTGTTTTACTCTCTTTGGTTGAGGGCAAAGGATGTTCTAATTCAAATAAGTCAT
TAGCTGACATAAATTTCAACTCTGTGGATGATGTTTTAGGTTCTGGGGATTGAGAATTTTTTTCTTTGCTAGCTTGCTCAGATGCTTGCATTTTG
GGCAGCAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289185] | SGN-U582601 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101627 [Download][View] | Facility Assigned ID: TPSCT53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0106 | Quality Trim Threshold: 12.5 |
Working
