EST details — SGN-C77043
| Search information |
| Request: 77043 | Match: SGN-C77043 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77043 | Clone name: cLES-1-I15 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C186008 is on microarray TOM1: SGN-S1-1-3.2.7.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C77043 [cLES-1-I15] | Trace: SGN-T97287 | EST: SGN-E283611 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C186008 [TUS-48-N22] | Trace: SGN-T192445 | EST: SGN-E391119 | Direction: 5' | Facility: INRA |
| Clone: SGN-C186008 [TUS-48-N22] | Trace: SGN-T192769 | EST: SGN-E391443 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283610 | Length: 444 bp (840 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283610 [] (trimmed)
TAACTGGCTAACTCTCAGTTAACTCTGGAGGAAACAACAAACAAAGGGGTGGTGCTCGCCCTGTATGAAGCCTTGAGCTCACACGACGTCGTTCA
GGTCCAGAAACTCCTGGCCTCCGACCTTGAGTGGTGGTTCCATGGTCCTCCTTCTCATCAATTTTTGATGCAAATACTCACCGGTACTGCTAAAT
TCGATAACGCCTCTTTTCAATTTCTTCATAAAACCATTGACGTATTCGGCTCCGTGGTTCTCGTGGAAGGCTGTGACCCGACCCGATCTATTACT
TGGGTTCACGCCTGGACTGTTACGGATGGGGTAATTACCCAGGTTAGGGAGTATTTCAATACCTGACTTACTGGAACCCGTTTTCGGAAGAAAAA
CCAATCCGATATTTCCTCTATTACGCCTCTGCATTGTCCCTCTGTTTGGGAGAGTAGCTTACCT
GGTCCAGAAACTCCTGGCCTCCGACCTTGAGTGGTGGTTCCATGGTCCTCCTTCTCATCAATTTTTGATGCAAATACTCACCGGTACTGCTAAAT
TCGATAACGCCTCTTTTCAATTTCTTCATAAAACCATTGACGTATTCGGCTCCGTGGTTCTCGTGGAAGGCTGTGACCCGACCCGATCTATTACT
TGGGTTCACGCCTGGACTGTTACGGATGGGGTAATTACCCAGGTTAGGGAGTATTTCAATACCTGACTTACTGGAACCCGTTTTCGGAAGAAAAA
CCAATCCGATATTTCCTCTATTACGCCTCTGCATTGTCCCTCTGTTTGGGAGAGTAGCTTACCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283610] | SGN-U581518 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97286 [Download][View] | Facility Assigned ID: TPSAA56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 14.5 |
Working
