EST details — SGN-C77164
| Search information |
| Request: 77164 | Match: SGN-C77164 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77164 | Clone name: cLES-20-C18 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179250 is on microarray TOM1: SGN-S1-1-1.1.2.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179250 [TUS-31-E8] | Trace: SGN-T185195 | EST: SGN-E373753 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179250 [TUS-31-E8] | Trace: SGN-T185196 | EST: SGN-E373754 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290527 | Length: 204 bp (1198 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290527 [] (trimmed)
AAAGCACTCTATGCTTCGAAAATATGTAGCTATGCTCAGGGAATGAATTTGATAAGGGCAAAAAGTGCTGAGAAGGGATGGGACTTGAAACTAGG
GGAGCTTGCCAGGATCTGGAAAGGTGGGTGCATTATCCGTGCAATATTTTTGGATCGTATTAAGCAAGCTTATGACAGAAACGCAGATCTCGCTA
ACCTACTTGTGGAT
GGAGCTTGCCAGGATCTGGAAAGGTGGGTGCATTATCCGTGCAATATTTTTGGATCGTATTAAGCAAGCTTATGACAGAAACGCAGATCTCGCTA
ACCTACTTGTGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290527] | SGN-U567373 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102206 [Download][View] | Facility Assigned ID: TPSCZ21THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.945 | Expected Error Rate: 0.0276 | Quality Trim Threshold: 14.5 |
Working
