EST details — SGN-C77556
| Search information |
| Request: 77556 | Match: SGN-C77556 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77556 | Clone name: cLES-2-G8 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184643 is on microarray TOM1: SGN-S1-1-8.2.14.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184643 [TUS-45-F1] | Trace: SGN-T198671 | EST: SGN-E397345 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184643 [TUS-45-F1] | Trace: SGN-T198672 | EST: SGN-E397346 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E281978 | Length: 454 bp (605 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E281978 [] (trimmed)
TAATACTCAGGAGTTGAGGAGAGAAAGATAAGGAAAGTAAGAAAATGGCATCAGCATCTCTCCTCAAGACATCTCCGGTCCTTGACAAAACTGAG
TTTGTAAAAGGCCAATCCCTACGCCTTCCATCCGTCTCCGTCCGCTGTCAACCATCTGCACTCACTGTTCGTGCTAGCTCCTATGCTGATGAGCT
CGTCAAAACCGCGAAAACTATTGCATCCCCTGGTCGTGGAATTTTGGCCATGGATGAGTCCAATGCTACCTGTGGGAAGCGTTTAGCTTCAATCG
GAATGGAGAACACTGAGGCTAACCGCCAGGCGTTCAGGACCCTGCTAGTTTCAGTTCCTGGACTAGGGGAGTACATCTCTGGTGCAATCCTCTTT
GAGGAGACACTTTATCAATCAACCGTCGAGGGAAAGAAAATGGTTGATGTGCTTGTTGAGCAGAACATTGGTCC
TTTGTAAAAGGCCAATCCCTACGCCTTCCATCCGTCTCCGTCCGCTGTCAACCATCTGCACTCACTGTTCGTGCTAGCTCCTATGCTGATGAGCT
CGTCAAAACCGCGAAAACTATTGCATCCCCTGGTCGTGGAATTTTGGCCATGGATGAGTCCAATGCTACCTGTGGGAAGCGTTTAGCTTCAATCG
GAATGGAGAACACTGAGGCTAACCGCCAGGCGTTCAGGACCCTGCTAGTTTCAGTTCCTGGACTAGGGGAGTACATCTCTGGTGCAATCCTCTTT
GAGGAGACACTTTATCAATCAACCGTCGAGGGAAAGAAAATGGTTGATGTGCTTGTTGAGCAGAACATTGGTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E281978] | SGN-U580022 | Tomato 200607 | Build 2 | 373 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97138 [Download][View] | Facility Assigned ID: TPSAF40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
