EST details — SGN-C78723
| Search information |
| Request: 78723 | Match: SGN-C78723 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78723 | Clone name: cLES-6-I9 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185472 is on microarray TOM1: SGN-S1-1-3.4.9.3
See unigene SGN-U583504 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C185472 [TUS-47-H14] | Trace: SGN-T192483 | EST: SGN-E391157 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185472 [TUS-47-H14] | Trace: SGN-T192669 | EST: SGN-E391343 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286939 | Length: 663 bp (846 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286939 [] (trimmed)
TTTTCAAGAAAAAAAATGGATTCTTCTTCACTAGAAATGATAAGACAACATCTTCTTGATGATGTTGTTTTCATGGAAACTTGTTCTTCTTCTTC
TTCTTCTTCATTAGAAACAACAAGTAGTGCACTTTATTCTCAAACCTCATCGAATTCGGAATCTTTAGAATCATTAACCTCTGAGATCAAACTTG
AAAGCAATTTCTCTGTTTATCCTGATTTCATCAATACACCTCAAAGTTCAAATCTTGAATCTGTCTCTCGTTTTTTCGATAACTCAACTATTGAA
TTCCAAGCTAAACCCCAAAAGAAAAGAAGTTTCAATGATCGAAAACCTTCGTTAAACATTTCGATTCCTTCTGTTAAGAAAACAGAGGAACCAAA
AACAGGGGAAGTAAAAACAGGGGAACCAAAAACAGAGGAGCCAAAAACAGGGGAAGTGAAAACAGAGTACTCTGTTAAGGAGAAAATGGTAGAAA
ATTCGGAGAAAAAGCGATACAGAGGAGTGAGACAAAGGCCATGGGGGAAATTTGCAGCGGAGATTCGTGACCCAACTAGAAAGGGGACACGAGTT
TGGTTAGGAACATTCGATACTGCAATGGATGCAGCCATGGCATATGACAGAGCAGCATTTAGGCTCAGAGGGAGTAAAGCAATCTTGAATTTT
TTCTTCTTCATTAGAAACAACAAGTAGTGCACTTTATTCTCAAACCTCATCGAATTCGGAATCTTTAGAATCATTAACCTCTGAGATCAAACTTG
AAAGCAATTTCTCTGTTTATCCTGATTTCATCAATACACCTCAAAGTTCAAATCTTGAATCTGTCTCTCGTTTTTTCGATAACTCAACTATTGAA
TTCCAAGCTAAACCCCAAAAGAAAAGAAGTTTCAATGATCGAAAACCTTCGTTAAACATTTCGATTCCTTCTGTTAAGAAAACAGAGGAACCAAA
AACAGGGGAAGTAAAAACAGGGGAACCAAAAACAGAGGAGCCAAAAACAGGGGAAGTGAAAACAGAGTACTCTGTTAAGGAGAAAATGGTAGAAA
ATTCGGAGAAAAAGCGATACAGAGGAGTGAGACAAAGGCCATGGGGGAAATTTGCAGCGGAGATTCGTGACCCAACTAGAAAGGGGACACGAGTT
TGGTTAGGAACATTCGATACTGCAATGGATGCAGCCATGGCATATGACAGAGCAGCATTTAGGCTCAGAGGGAGTAAAGCAATCTTGAATTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286939] | SGN-U583504 | Tomato 200607 | Build 2 | 58 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98391 [Download][View] | Facility Assigned ID: TPSAU53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.945 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |
Working
