EST details — SGN-C78790
| Search information |
| Request: 78790 | Match: SGN-C78790 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78790 | Clone name: cLES-6-M16 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184659 is on microarray TOM1: SGN-S1-1-8.2.14.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184659 [TUS-45-F17] | Trace: SGN-T198684 | EST: SGN-E397358 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184659 [TUS-45-F17] | Trace: SGN-T198685 | EST: SGN-E397359 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286997 | Length: 609 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286997 [] (trimmed)
CTTGTTACCTCACCTTCACTCAGGATGGGCCGTCGATCAAGCCATTCTCGCTGAAGAGGAACGCCTTGTCATCATCCGCTTCGGCCATGACTGGG
ATGAAACTTGTATGCAGATGGATGAGGTGCTAGCTTCAGTTGCAGATACATTAAAGAATTTTGCTGTGATATACCTGGTGGACATAACAGAGGTC
CCTGATTTTAACACGATGTATGAATTGTACGATCCATCAACTATCATGTTCTTCTTCAGGAACAAGCACATCATGATTGATCTTGGCACAGGAAA
CAACAACAAGATCAACTGGGCACTCAAAGATAAACAGGAGTTCATTGATATTGTTGAGACAGTGTACCGTGGTGCACGAAAGGGTCGTGGTCTAG
TTATTGCACCAAAAGATTACTCTACCAAGTATCGTTACTGAGTGTGTTGATATTGTATTTTGTTTGTGGAATATGCTGCACTTTTATGACTGAAC
TGTAACATACAGTTGCTGAGTGGTTTCCATTAGACTGATTCAGTTGCTGTCAGGAACCAAGTGTACAATAATTTTCCATTGTTGCAAGTGGAAGG
ACTAAACTCTTGTTGAAACCATGTTATGATCTTTCTACT
ATGAAACTTGTATGCAGATGGATGAGGTGCTAGCTTCAGTTGCAGATACATTAAAGAATTTTGCTGTGATATACCTGGTGGACATAACAGAGGTC
CCTGATTTTAACACGATGTATGAATTGTACGATCCATCAACTATCATGTTCTTCTTCAGGAACAAGCACATCATGATTGATCTTGGCACAGGAAA
CAACAACAAGATCAACTGGGCACTCAAAGATAAACAGGAGTTCATTGATATTGTTGAGACAGTGTACCGTGGTGCACGAAAGGGTCGTGGTCTAG
TTATTGCACCAAAAGATTACTCTACCAAGTATCGTTACTGAGTGTGTTGATATTGTATTTTGTTTGTGGAATATGCTGCACTTTTATGACTGAAC
TGTAACATACAGTTGCTGAGTGGTTTCCATTAGACTGATTCAGTTGCTGTCAGGAACCAAGTGTACAATAATTTTCCATTGTTGCAAGTGGAAGG
ACTAAACTCTTGTTGAAACCATGTTATGATCTTTCTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286997] | SGN-U570416 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98449 [Download][View] | Facility Assigned ID: TPSAV80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0115 | Quality Trim Threshold: 12.5 |
Working
