EST details — SGN-C78806

Search information 
Request: 78806Match: SGN-C78806
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C78806Clone name: cLES-6-N10
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179100 is on microarray TOM1: SGN-S1-1-7.3.3.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179100 [TUS-30-O2] Trace: SGN-T184629 EST: SGN-E372015 Direction: 3' Facility: INRA
Clone: SGN-C179100 [TUS-30-O2] Trace: SGN-T184630 EST: SGN-E372016 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E287221Length: 496 bp (856 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E287221 [] (trimmed) GGTGCAACAGCTCCTCAAAGACTATTTTGACGGGAAGGAGCCCAGCAAGGGTGTAAATCCTGATGAAGCAGTTGCTTATGGTGCTGCTGTTCAAG
GTGGTATCCTCAGTGGTGAGGGTGGAGATGAAACTAAAGATATCCTTCTCCTGGATGTCGCTCCTCTCACCCTTGGTATTGAAACCGTTGGTGGT
GTGATGACCAAATTGATCCCCAGAAATACCGTTATCCCAACCAAGAAGTCCCAGGTCTTCACCACTTACCAAGACCAGCAGACCACTGTCTCCAT
TCAGGTTTTTGAAGGTGAAAGGAGTCTTACCAAGGACTGTAGGAATCTCGGGAAGTTTGATCTTACAGGAATTCCTCCAGCTCCAAGGGGAACCC
CCCAAATTGAGGTCACATTCGAAGTTGATGCCAATGGTATCTTGAATGTCAAAGCAGAAGACAAGGGTACTGGAAAAGCAGAGAAGATTACCATT
ACAAACGACAAGGGCCGCTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E287221] SGN-U570961 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T98673 [Download][View] Facility Assigned ID: TPSAX77TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0038 Quality Trim Threshold: 14.5