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EST details — SGN-C79774

Search information 
Request: 79774Match: SGN-C79774
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C79774Clone name: cLET-10-B11
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C183240 is on microarray TOM1: SGN-S1-1-3.3.3.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183240 [TUS-41-K14] Trace: SGN-T196513 EST: SGN-E395187 Direction: 5' Facility: INRA
Clone: SGN-C183240 [TUS-41-K14] Trace: SGN-T199478 EST: SGN-E398152 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E290729Length: 678 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E290729 [] (trimmed) GAAGAAGAAGAAGAAGAAAGAGAGCTTTTCCACATTTTGCATTCCCTGACTGTTTGCTAGTGTGTGCCCCCCCCTCTCTCTCTCCTCATCTCTCT
ACCAATTTTCTCTCCGAAAAAAGGAATAGCATAAGATGGCAGACGGAGAGGATATTCAGCCCCTTGTCTGTGACAATGGAACTGGAATGGTCAAG
GCTGGGTTCGCAGGAGATGATGCTCCACGAGCTGTATTTCCTAGTATTGTTGGCCGCCCCCGCCATACTGGTGTGATGGTGGGTATGGGTCAAAA
AGACGCCTATGTGGGAGATGAAGCTCAATCGAAGAGAGGTATTTTAACTCTTAAATACCCAATTGAGCACGGAATTGTCAGCAATTGGGATGATA
TGGAGAAGATATGGCATCATACTTTCTACAATGAGCTTCGTGTTGCCCCTGAGGAGCATCCTGTCCTCCTAACTGAAGCCCCTCTTAACCCAAAG
GCTAATCGTGAAAAGATGACCCAGATTATGTTTGAGACTTTCAATACCCCAGCTATGTATGTTGCTATTCAGGCTGTACTCTCACTGTATGCCAG
TGGTCGTACCACCGGTATTGTGTTGGACTCTGGTGATGGTGTCAGCCACACTGTCCCAATTTATGAAGGGTATGCCCTTCCACATGCCATTCTCC
GTCTTGACTTGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E290729] SGN-U580422 Tomato 200607 Build 2 87 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T104898 [Download][View] Facility Assigned ID: TMEBM06TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5