EST details — SGN-C79947

Search information 
Request: 79947Match: SGN-C79947
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C79947Clone name: cLET-10-L23
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C182063 is on microarray TOM1: SGN-S1-1-4.2.10.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182063 [TUS-38-J13] Trace: SGN-T194714 EST: SGN-E393388 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E290891Length: 534 bp (656 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E290891 [] (trimmed) GCACTCTGGTGGTGGAACAGGGTACCTCGCTTTATCAGTGCAATAGTTATAAACAGTGTATTTTTGACGAACCCAACGAAGTCTCCTATACTGTA
ATGCATCTAAATCTTGGAAGGCCTTTTGATCCCACCATTTCATGCCTTTAGTGTTACAAACTTGGACTTCTTGTGGCGTGGCAGCTTCACATCCA
TCCACGTGGAACGATGTGTATGACGCGGTGAATGGGGCGTTGGCCCAATTGGTTTTCTCAAGCCCACCTCTTGTGGCCCAATCATCTGCGTCCCA
TAGACTCGAGTATATCTTCATGGGCTGATTGAATGGAAATTTCACACCAAGATCTTTCGAATTTTTGAATGCTCTAATTGGAAAGTCGTCCACAA
AGATCACAATGAGGTATGTATTCCAAAGAACAGAATAAGAATGGTAGCCCTTGGTTGGATCAAACCAAAGATATATTCTCTGTTCTCTGTTTCCT
TTTCCTCCTGTGAATACATTTGTCTGCAATATGTATGGCTGCCCAGTTCTGTTCCCCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E290891] SGN-U578547 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105060 [Download][View] Facility Assigned ID: TMEBM72TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0003 Quality Trim Threshold: 14.5