EST details — SGN-C79984
| Search information |
| Request: 79984 | Match: SGN-C79984 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C79984 | Clone name: cLET-10-O11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
This clone has been mapped as cLET-10-O11.
| Additional sequencing |
| Clone: SGN-C190826 [TUS-61-G16] | Trace: SGN-T341774 | EST: SGN-E540899 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190826 [TUS-61-G16] | Trace: SGN-T341776 | EST: SGN-E540901 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E290802 | Length: 676 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290802 [] (trimmed)
TAACGCCGCGTTTGGATAAACTCAAAAAAAATATGGCTTCTGCTTTACAAATTTCTTCTCAGTACAGTAAAATTGCTCTTTGTTCTTTATTTCCT
GTTTTTCCAAATTTAAGAAAACCAAACAAGGCACTAAATTCAGTTACCTCAAATTCCAATAAAAAGTTTAAAATTAGAGCATTGAAGGAGAAAAC
AACAGAAGAAGTTAAATCTGCTGAGGAAATTACAAAGAAATTTGGTTTAGAAGCTGGCCTATGGAAGATATTTAGCTCAAAAGAGGATAGAGATG
AAGAGAACAAGGATAAGAAATCAAAAGGGGATCAAGCAAAAGAGCTTTTGGCAAAATATGGAGGAGCTTATTTAGCAACTTCAATTACTCTCTCA
TTGATATCATTTGGTCTCTGTTATGCTCTCATCAATTCTGGTGTTGATGTTCAATCCTTGCTACAAAAGGTTGGTATTTCTACTGATGAGACTGG
TGAGAAAGTGGGAACTTTTGCATTGGCTTATGCCGCTCACAAAGCCGCATCACCTATTAGATTTCCCCCTACTGTTGCTTTAACACCAATTGTTG
CTACTTGGATTGGAAAGAAAGTTGATAAAGAGAAGTAAAACTAGGTTGATTTTGGACACAATTTTGCTGCAGATGTAATATATGTGTTAGTAAAT
ACTACAGGTTA
GTTTTTCCAAATTTAAGAAAACCAAACAAGGCACTAAATTCAGTTACCTCAAATTCCAATAAAAAGTTTAAAATTAGAGCATTGAAGGAGAAAAC
AACAGAAGAAGTTAAATCTGCTGAGGAAATTACAAAGAAATTTGGTTTAGAAGCTGGCCTATGGAAGATATTTAGCTCAAAAGAGGATAGAGATG
AAGAGAACAAGGATAAGAAATCAAAAGGGGATCAAGCAAAAGAGCTTTTGGCAAAATATGGAGGAGCTTATTTAGCAACTTCAATTACTCTCTCA
TTGATATCATTTGGTCTCTGTTATGCTCTCATCAATTCTGGTGTTGATGTTCAATCCTTGCTACAAAAGGTTGGTATTTCTACTGATGAGACTGG
TGAGAAAGTGGGAACTTTTGCATTGGCTTATGCCGCTCACAAAGCCGCATCACCTATTAGATTTCCCCCTACTGTTGCTTTAACACCAATTGTTG
CTACTTGGATTGGAAAGAAAGTTGATAAAGAGAAGTAAAACTAGGTTGATTTTGGACACAATTTTGCTGCAGATGTAATATATGTGTTAGTAAAT
ACTACAGGTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290802] | SGN-U564497 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104971 [Download][View] | Facility Assigned ID: TMEBK90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
