EST details — SGN-C80003
| Search information |
| Request: 80003 | Match: SGN-C80003 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80003 | Clone name: cLET-10-O9 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184727 is on microarray TOM1: SGN-S1-1-4.1.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184727 [TUS-45-I13] | Trace: SGN-T198573 | EST: SGN-E397247 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184727 [TUS-45-I13] | Trace: SGN-T200011 | EST: SGN-E398685 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290690 | Length: 634 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290690 [] (trimmed)
TTTTTTCCTCTATTCTCTTTCTCTCTTTACTTTTTCTTCTTTGTGTACCAAAAAGAAAATAAAAATAAAAATGAACAGAGAGCATTGAACAAACA
CTCTATCAAAAAGCCATAGCTATGGAGTTTCAGGACCACTTTTCTCAAGAAATGGTTCTTCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAAAA
CGCGGTATTGCGTTCCATGCTACCTGAATCTCCTCATCACGACGCTCGAAAATCACCTCCGACTTGGCTCAATACTTCTCTCCTTCGTCAACAAC
ACAGTCAGTTTGGTAACGCATCCTCACCTTCCTCGGCTGCAGCTGCAGCTGCCGTAGCCGGAGGGAATAATTTCCTTCATCTCCAGACATCTAAC
TCCGACTCGTCAAACTCTAACCAGTGGCTCTCACCTACTGCGGCGGCTGGAGGTGGAGGTAACGGCGGTGGAGGTGGGCATAATGATGAGTTATC
AGAGTCGATGAATTTTGCGAAGAAGATGAGTCAACAGCATAGTGGAGGAGGAGAAGAAAACAATAATAATAATAATAATAATAATAATAATAATA
ATGAAGAGGAGAACTCATGGGAGAGAGAGAAATGTAAAGCGGATATATTGAATCATCCTTTATA
CTCTATCAAAAAGCCATAGCTATGGAGTTTCAGGACCACTTTTCTCAAGAAATGGTTCTTCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAAAA
CGCGGTATTGCGTTCCATGCTACCTGAATCTCCTCATCACGACGCTCGAAAATCACCTCCGACTTGGCTCAATACTTCTCTCCTTCGTCAACAAC
ACAGTCAGTTTGGTAACGCATCCTCACCTTCCTCGGCTGCAGCTGCAGCTGCCGTAGCCGGAGGGAATAATTTCCTTCATCTCCAGACATCTAAC
TCCGACTCGTCAAACTCTAACCAGTGGCTCTCACCTACTGCGGCGGCTGGAGGTGGAGGTAACGGCGGTGGAGGTGGGCATAATGATGAGTTATC
AGAGTCGATGAATTTTGCGAAGAAGATGAGTCAACAGCATAGTGGAGGAGGAGAAGAAAACAATAATAATAATAATAATAATAATAATAATAATA
ATGAAGAGGAGAACTCATGGGAGAGAGAGAAATGTAAAGCGGATATATTGAATCATCCTTTATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290690] | SGN-U571928 | Tomato 200607 | Build 2 | 98 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104859 [Download][View] | Facility Assigned ID: TMEBK89TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0033 | Quality Trim Threshold: 14.5 |
Working
