EST details — SGN-C80006
| Search information |
| Request: 80006 | Match: SGN-C80006 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80006 | Clone name: cLET-10-P13 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184729 is on microarray TOM1: SGN-S1-1-2.1.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184729 [TUS-45-I15] | Trace: SGN-T198492 | EST: SGN-E397166 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184729 [TUS-45-I15] | Trace: SGN-T198574 | EST: SGN-E397248 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290765 | Length: 559 bp (649 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290765 [] (trimmed)
GCTTACAATTGCACCTGAATATGCCTTTGGTTCATCTGAGTCGAAGCAAGATTCAGCTGTTGTTCCTCCTAATTCAACTGTGCATTATGAGGTTG
AGCTTGTTTCTTTTCTCAAGGACAAGGAATCGTGGGATATGAGTACCCCGGAGAAAATTGAGGCTGCTGGCAAAAAGAAAGAAGAAGGGAATGCA
CTGTTCAAGGCTGGTAAATACGCAAGGGCATCTAAGAGATATGAGAAGGCTGCTAAATTCATTGAGTATGATACTAACTTCAGTGAGGAGGAAAA
GAAACAGTCTAAAGCATTGAAGATCACCTGCAACTTAAATAATGCAGCTTGCAAGTTGAAATTGAAAGATTACAAGCAGGCTGAGAAACTGTGTA
CCAAGGTGTTGGAACTGGATAGTGCAAATGTCAAAGCTCTTTACCGCAGAGCTCAAGCATATATGAACATGGCTGATCTTGATCTGGCTGAATTT
GACATTAAGAAAGCTCTTGAGATTGATCCTGACAACAGGGATGTGAAGCTTGAGTACAAAGCTCTAAAGGAGAAAGTCAAGGAA
AGCTTGTTTCTTTTCTCAAGGACAAGGAATCGTGGGATATGAGTACCCCGGAGAAAATTGAGGCTGCTGGCAAAAAGAAAGAAGAAGGGAATGCA
CTGTTCAAGGCTGGTAAATACGCAAGGGCATCTAAGAGATATGAGAAGGCTGCTAAATTCATTGAGTATGATACTAACTTCAGTGAGGAGGAAAA
GAAACAGTCTAAAGCATTGAAGATCACCTGCAACTTAAATAATGCAGCTTGCAAGTTGAAATTGAAAGATTACAAGCAGGCTGAGAAACTGTGTA
CCAAGGTGTTGGAACTGGATAGTGCAAATGTCAAAGCTCTTTACCGCAGAGCTCAAGCATATATGAACATGGCTGATCTTGATCTGGCTGAATTT
GACATTAAGAAAGCTCTTGAGATTGATCCTGACAACAGGGATGTGAAGCTTGAGTACAAAGCTCTAAAGGAGAAAGTCAAGGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290765] | SGN-U567765 | Tomato 200607 | Build 2 | 114 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104934 [Download][View] | Facility Assigned ID: TMEBM91TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |
Working
