EST details — SGN-C80184
| Search information |
| Request: 80184 | Match: SGN-C80184 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80184 | Clone name: cLET-11-H6 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179675 is on microarray TOM1: SGN-S1-1-8.3.1.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179675 [TUS-32-G1] | Trace: SGN-T185822 | EST: SGN-E373159 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179675 [TUS-32-G1] | Trace: SGN-T185823 | EST: SGN-E373160 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292927 | Length: 600 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292927 [] (trimmed)
AAAATCCAAAAACAAAAAGAAAGTTTTTTGATTGTGCCCTAAAAGTTCATATTCTTATCCTTCTTCGCCGCCTCATTTGGTTTCTGTTCAAACCC
TAATATTTCAAGTCGATTTATCTCTGCTGATTAATGTTTCGGAGTTGTTGGATCCGTTTCAATCATCATTCATGGTTGAAAGTTTGAATTTTTAT
TCATATTGAAAGATCTGATTTTGATTAGAGGGATTCGAAGAGATCCGTTTGTATTCATTCCGGCGATTCAGCATTTGCTTGATCGGAATTGGTGA
AGATAGATTTTTCATTTGATTGAACGTACTTTTTTTTGGCAAAAGCGAAAATGTCGATTTTGCCAAAAACTGATTCAATCCACATTCGAGAGGTT
TGGTTTGACAATCTGGAGGAAGAGTTCGCATTGATGCGTGAAATAGTCGATGATTTTCCGTTTGTTGCCATGGATACGGAGTTTCCCGGAGTGGT
AATCCGGCCGGTCGGGAATTTTAAGAACAGCAACGATTACCATTACCAAACGCTCAAGGATAACGTGGATATGTTGAAGTTGATTCAGTTAGGGC
TGACCTTTTCAGATGAAAATGGCAACTTGC
TAATATTTCAAGTCGATTTATCTCTGCTGATTAATGTTTCGGAGTTGTTGGATCCGTTTCAATCATCATTCATGGTTGAAAGTTTGAATTTTTAT
TCATATTGAAAGATCTGATTTTGATTAGAGGGATTCGAAGAGATCCGTTTGTATTCATTCCGGCGATTCAGCATTTGCTTGATCGGAATTGGTGA
AGATAGATTTTTCATTTGATTGAACGTACTTTTTTTTGGCAAAAGCGAAAATGTCGATTTTGCCAAAAACTGATTCAATCCACATTCGAGAGGTT
TGGTTTGACAATCTGGAGGAAGAGTTCGCATTGATGCGTGAAATAGTCGATGATTTTCCGTTTGTTGCCATGGATACGGAGTTTCCCGGAGTGGT
AATCCGGCCGGTCGGGAATTTTAAGAACAGCAACGATTACCATTACCAAACGCTCAAGGATAACGTGGATATGTTGAAGTTGATTCAGTTAGGGC
TGACCTTTTCAGATGAAAATGGCAACTTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292927] | SGN-U579581 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105390 [Download][View] | Facility Assigned ID: TMEBR39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
