EST details — SGN-C80286
| Search information |
| Request: 80286 | Match: SGN-C80286 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80286 | Clone name: cLET-11-M20 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179715 is on microarray TOM1: SGN-S1-1-8.4.1.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179715 [TUS-32-H17] | Trace: SGN-T186152 | EST: SGN-E372999 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179715 [TUS-32-H17] | Trace: SGN-T186153 | EST: SGN-E373000 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292689 | Length: 480 bp (762 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292689 [] (trimmed)
TTTGCATTGTGCTCAGAAGCAGCAGCAACAACACAGAAAATGACTTTTAAGAGAAGAAATGGAGGTCGTAACAAGCATGGACGTGGCCATGTCAA
ATTCATCCGTTGCTCAAACTGCGGCAAGTGCTGCCCTAAGGACAAAGCCATCAAGAGGTTTCTTGTAAGGAACATTGTTGAACAAGCAGCAGTGA
GGGATGTTCAGGAAGCTTGTGCTTTTGAATTGTACACTCTTCCTAAGCTGTACTTGAAGATGCAATATTGTGTCTCATGTGCCATTCACTCTAAG
GTTGTTAGGGTTCGTTCTCGTACTGACAGGAGGGTTCGTGAGCCTCCACAGCGTTTCAGACGCCCAAGGGATGATCTTCCTAAGGCTGGTCAAGC
TCCACGCCCAGCCGGAGGTGCTCCTCCTGCTGCTGCTCGTACTTAAGTGAAACAACTGCCATTAGGCTATTGTTTTGTTTTTTTTGTTTAATTTG
AGCAA
ATTCATCCGTTGCTCAAACTGCGGCAAGTGCTGCCCTAAGGACAAAGCCATCAAGAGGTTTCTTGTAAGGAACATTGTTGAACAAGCAGCAGTGA
GGGATGTTCAGGAAGCTTGTGCTTTTGAATTGTACACTCTTCCTAAGCTGTACTTGAAGATGCAATATTGTGTCTCATGTGCCATTCACTCTAAG
GTTGTTAGGGTTCGTTCTCGTACTGACAGGAGGGTTCGTGAGCCTCCACAGCGTTTCAGACGCCCAAGGGATGATCTTCCTAAGGCTGGTCAAGC
TCCACGCCCAGCCGGAGGTGCTCCTCCTGCTGCTGCTCGTACTTAAGTGAAACAACTGCCATTAGGCTATTGTTTTGTTTTTTTTGTTTAATTTG
AGCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292689] | SGN-U580053 | Tomato 200607 | Build 2 | 33 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105152 [Download][View] | Facility Assigned ID: TMEBP82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
