EST details — SGN-C80311

Search information 
Request: 80311Match: SGN-C80311
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C80311Clone name: cLET-11-N22
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179727 is on microarray TOM1: SGN-S1-1-4.1.1.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179727 [TUS-32-I5] Trace: SGN-T185747 EST: SGN-E373084 Direction: 3' Facility: INRA
Clone: SGN-C179727 [TUS-32-I5] Trace: SGN-T185748 EST: SGN-E373085 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292950Length: 475 bp (920 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292950 [] (trimmed) GGGCTTTCGAAGGCGAGAAAATAATTCATGGGAAGCCATCTGGTATTGACAACACAGTGAGCACATATGGAAATATGATCAAGTTTAAGTCAGGT
GATTTGACACGCCTCAAAACAAACATGCCACTTAAAATGCTGATCACTAACACAAAGGTTGGGAGAAATACAAAGGCATTGGTGGCTAGCGTCTC
TGAGAGGACCTTGCGGCATCCGACTGCAATGGCTTCTGTGTTTACTGCGGTGGATTCTATCAGTAATGAAGTGGCTGCAATTATTCAATCACCTG
TCCCTGATGATCTTGCCATAACTGAGAAAGAAGAAAAACTGGCAGAGTTGATGGCGATGAACCAAGGATTGCTTCAGTGCATGGGTGTTAGCCAT
GCTTCCATAGAAACTGTTCTTCGAACAACTCTAAAGTACAAACTGTCTACTAAGTTAACTGGAGCTGGTGGTGGAGGCTGTGTTTTGACATTACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292950] SGN-U567385 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105413 [Download][View] Facility Assigned ID: TMEBR83TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5