EST details — SGN-C80850
| Search information |
| Request: 80850 | Match: SGN-C80850 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80850 | Clone name: cLET-13-J13 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185642 is on microarray TOM1: SGN-S1-1-1.3.9.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185642 [TUS-47-O16] | Trace: SGN-T191980 | EST: SGN-E390654 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185642 [TUS-47-O16] | Trace: SGN-T191981 | EST: SGN-E390655 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294134 | Length: 647 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294134 [] (trimmed)
CAAACATGGCCTACTTGAGATCTTCTTTTGTTTTCTTCCTTCTTGCTTTTGTGACTTACACTTATGCTGCCACTTTCGAGGTACGCAACAACTGT
CCATACACCGTCTGGGCGGCGTCGACCCCAATAGGCGGTGGTCGACGTCTTGATCGAGGCCAAACATGGGTCATCAATGCACCGAGGGGCACTAA
GATGGCACGTATATGGGGTCGTACGAATTGCAACTTTGATGGTGCTGGTAGAGGTTCATGTCAGACTGGTGATTGTGGTGGGGTCTTGCAATGTA
CCGGGTGGGGCAAACCACCAAACACCCTGGCCGAGTACGCCTTGGACCAGTTTAGCAACCTAGATTTCTGGGACATTTCTTTAGTCGATGGATTT
AATATTCCAATGACTTTCGCCCCGACCAATCCTAGTGGAGGGAAATGCCATGCAATTCATTGTACGGCTAATATAAATGGTGAATGTCCTGGTTC
ACTTAGGGTACCCGGAGGATGTAACAATCCTTGTACCACGTTCGGAGGACAACAATATTGTTGCACACAAGGTCCATGTGGCCCTACTGATTTGG
CGAGATTTTTCAAACAAAGATGTCCTGATGCGTATAGCTACCCACAAGATGATCCTACTAGCACATTTACTTGCCCT
CCATACACCGTCTGGGCGGCGTCGACCCCAATAGGCGGTGGTCGACGTCTTGATCGAGGCCAAACATGGGTCATCAATGCACCGAGGGGCACTAA
GATGGCACGTATATGGGGTCGTACGAATTGCAACTTTGATGGTGCTGGTAGAGGTTCATGTCAGACTGGTGATTGTGGTGGGGTCTTGCAATGTA
CCGGGTGGGGCAAACCACCAAACACCCTGGCCGAGTACGCCTTGGACCAGTTTAGCAACCTAGATTTCTGGGACATTTCTTTAGTCGATGGATTT
AATATTCCAATGACTTTCGCCCCGACCAATCCTAGTGGAGGGAAATGCCATGCAATTCATTGTACGGCTAATATAAATGGTGAATGTCCTGGTTC
ACTTAGGGTACCCGGAGGATGTAACAATCCTTGTACCACGTTCGGAGGACAACAATATTGTTGCACACAAGGTCCATGTGGCCCTACTGATTTGG
CGAGATTTTTCAAACAAAGATGTCCTGATGCGTATAGCTACCCACAAGATGATCCTACTAGCACATTTACTTGCCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294134] | SGN-U581103 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105977 [Download][View] | Facility Assigned ID: TMEBY55TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.990 | Expected Error Rate: 0.0109 | Quality Trim Threshold: 14.5 |
Working
