EST details — SGN-C81091
| Search information |
| Request: 81091 | Match: SGN-C81091 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81091 | Clone name: cLET-14-H18 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184705 is on microarray TOM1: SGN-S1-1-2.4.14.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81091 [cLET-14-H18] | Trace: SGN-T106318 | EST: SGN-E294475 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C184705 [TUS-45-H15] | Trace: SGN-T198698 | EST: SGN-E397372 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184705 [TUS-45-H15] | Trace: SGN-T198699 | EST: SGN-E397373 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294474 | Length: 511 bp (845 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294474 [] (trimmed)
GTAAAATGGCTACCAAACATCTTTTTTTCTTTGCTATTCTCTTGTTTTCAGCTGCCTCTGTTTTTGCAGAGGAAAATCCTAGCCTTGTAATGGAC
TATTACAAGGACACTTGCCCTCAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAGAATACTGCATTTTCTTGGCT
AAGAAACATATTCCATGACTGCTTTGTTGAGTCATGTGATGCTCCTTGTTGCTGGACTCAACAAGGAGGATGCTTCTGAGAAAGAGACAGACAGG
AGTTTTGGTATGAGAAATTTCAGATACATTGAGACTATTAAAGAAGCTGTAGAAAGGGAGTGCCCTGGTGTTGTTTCTTGTGCTGATATTCTTGT
GTTGTCTGGTAGAGATGGTATTGTTGCTCTAGGAGGGCCACACATTCCTCTCAAAACTGGAAGAAGAGATGGAAGAAAAAGCAGAGCAGACATTC
TTGAACAGCACCTCCCAGATCACAATGAAAGCATGA
TATTACAAGGACACTTGCCCTCAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAGAATACTGCATTTTCTTGGCT
AAGAAACATATTCCATGACTGCTTTGTTGAGTCATGTGATGCTCCTTGTTGCTGGACTCAACAAGGAGGATGCTTCTGAGAAAGAGACAGACAGG
AGTTTTGGTATGAGAAATTTCAGATACATTGAGACTATTAAAGAAGCTGTAGAAAGGGAGTGCCCTGGTGTTGTTTCTTGTGCTGATATTCTTGT
GTTGTCTGGTAGAGATGGTATTGTTGCTCTAGGAGGGCCACACATTCCTCTCAAAACTGGAAGAAGAGATGGAAGAAAAAGCAGAGCAGACATTC
TTGAACAGCACCTCCCAGATCACAATGAAAGCATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294474] | SGN-U577555 | Tomato 200607 | Build 2 | 210 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106317 [Download][View] | Facility Assigned ID: TMECD45TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |
Working
