EST details — SGN-C81125
| Search information |
| Request: 81125 | Match: SGN-C81125 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81125 | Clone name: cLET-14-J22 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185032 is on microarray TOM1: SGN-S1-1-3.2.12.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81125 [cLET-14-J22] | Trace: SGN-T106171 | EST: SGN-E294328 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C185032 [TUS-46-F6] | Trace: SGN-T192252 | EST: SGN-E390926 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185032 [TUS-46-F6] | Trace: SGN-T197612 | EST: SGN-E396286 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294327 | Length: 450 bp (831 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294327 [] (trimmed)
AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATA
TCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAA
ACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGC
TTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCT
CAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTC
TCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAA
ACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGC
TTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCT
CAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294327] | SGN-U569579 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106170 [Download][View] | Facility Assigned ID: TMECD59TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
