EST details — SGN-C81259
Search information |
Request: 81259 | Match: SGN-C81259 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C81259 | Clone name: cLET-15-F17 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184711 is on microarray TOM1: SGN-S1-1-4.4.14.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C81259 [cLET-15-F17] | Trace: SGN-T106503 | EST: SGN-E293552 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E293551 | Length: 531 bp (875 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293551 [] (trimmed)
TGCTGAGGACATGTTTCATTGGCAAGCAACGATCATGGGTCCTCCAGACAGTCCTTATTCCGGTGGAGTTTTCCTGGTGACAATCCATTTTCCTC
CAGATTATCCATTCAAGCCACCTAAGGTGGCTTTCAGGACAAAAGTTTTCCACCCAAACATAAACAGCAACGGAAGCATATGTCTTGACATTTTA
AAGGAGCAGTGGAGCCCTGCTCTAACAATTTCCAAGGTGTTGCTTTCGATATGTTCACTTCTGACGGACCCTAATCCTGATGATCCTTTGGTCCC
GGAGATTGCACACATGTACAAGACAGACCGGAACAAGTACGAGAGTACTGCAAGGAGCTGGACCCAGAAGTATGCCATGGGCTAAATGCACATTG
GTATTTGTGGGATCAGGACATTGTACTTTCAGACACTTTGTTATTTACATTGAATATATGAATGAGTTCATCTGTTCTTTGAGGAGAGGAAAATG
ATGGATGCTGCTCTTTAATAGTTGTATGAACAATTTGATCTTTGAAAGAAACCAAT
CAGATTATCCATTCAAGCCACCTAAGGTGGCTTTCAGGACAAAAGTTTTCCACCCAAACATAAACAGCAACGGAAGCATATGTCTTGACATTTTA
AAGGAGCAGTGGAGCCCTGCTCTAACAATTTCCAAGGTGTTGCTTTCGATATGTTCACTTCTGACGGACCCTAATCCTGATGATCCTTTGGTCCC
GGAGATTGCACACATGTACAAGACAGACCGGAACAAGTACGAGAGTACTGCAAGGAGCTGGACCCAGAAGTATGCCATGGGCTAAATGCACATTG
GTATTTGTGGGATCAGGACATTGTACTTTCAGACACTTTGTTATTTACATTGAATATATGAATGAGTTCATCTGTTCTTTGAGGAGAGGAAAATG
ATGGATGCTGCTCTTTAATAGTTGTATGAACAATTTGATCTTTGAAAGAAACCAAT
Unigenes |
Current Unigene builds | |||||
[SGN-E293551] | SGN-U579276 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T106502 [Download][View] | Facility Assigned ID: TMECG33TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 12.5 |