EST details — SGN-C81342
| Search information |
| Request: 81342 | Match: SGN-C81342 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81342 | Clone name: cLET-15-N18 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184825 is on microarray TOM1: SGN-S1-1-2.1.14.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184825 [TUS-45-M15] | Trace: SGN-T198512 | EST: SGN-E397186 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184825 [TUS-45-M15] | Trace: SGN-T198589 | EST: SGN-E397263 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293526 | Length: 526 bp (937 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293526 [] (trimmed)
AATATGTCAGTGACACTTCATACAAATCTAGGTGATATCAAGTGCGAAATCTTCTGTGATGAAGTGCCAAGAACAGCAGAGAATTTCTTGGCGTT
ATGCTCAAGTGATTATTATGATGGGACCATATTCCATAGAAACATAAAGGGTTTCATGATCCAAGGTGGTGATCCAACTGGTACTGGGAAAGGTG
GGACAAGTATTTGGGGAAAAAAGTTCAATGACGAGATAAGGGAGTCTCTCAAGCACAATGCAAGAGGGATGTTGGCAATGGCCAACAGTGGCCCT
AATACCAATGGGAGTCAGTTTTTCATTACATATGCCAAGCAACCACATCTCAATGGATTGTACACCATCTTCGGGAAAGTGATACATGGATTTGA
GGTTCTTGATCTCATGGAAAAGACTCCAACAGGACCAGGTGATAAACCCCTTGCCGAGATCAGGCTCAACCGGGTGACCATTCATGCTAATCCAC
TTGCTGGCTGACATACTTTTGAAGCATGCCAAAGCAGTATGTGTAATCTCA
ATGCTCAAGTGATTATTATGATGGGACCATATTCCATAGAAACATAAAGGGTTTCATGATCCAAGGTGGTGATCCAACTGGTACTGGGAAAGGTG
GGACAAGTATTTGGGGAAAAAAGTTCAATGACGAGATAAGGGAGTCTCTCAAGCACAATGCAAGAGGGATGTTGGCAATGGCCAACAGTGGCCCT
AATACCAATGGGAGTCAGTTTTTCATTACATATGCCAAGCAACCACATCTCAATGGATTGTACACCATCTTCGGGAAAGTGATACATGGATTTGA
GGTTCTTGATCTCATGGAAAAGACTCCAACAGGACCAGGTGATAAACCCCTTGCCGAGATCAGGCTCAACCGGGTGACCATTCATGCTAATCCAC
TTGCTGGCTGACATACTTTTGAAGCATGCCAAAGCAGTATGTGTAATCTCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293526] | SGN-U566538 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106477 [Download][View] | Facility Assigned ID: TMECH81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
