EST details — SGN-C82119
| Search information |
| Request: 82119 | Match: SGN-C82119 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82119 | Clone name: cLET-19-P21 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181882 is on microarray TOM1: SGN-S1-1-1.2.10.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82119 [cLET-19-P21] | Trace: SGN-T107286 | EST: SGN-E296336 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E296478 | Length: 699 bp (829 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296478 [] (trimmed)
CAACAACAACCCCCAAAATTATTAATTTTTTTTTAAAAAAAAAATGTATTTTCAAGCCTTGTTCCTCTTCTCTCTTGTCATCATCTCCTCCTCTC
AAGCCGCGGTCCTCGATTTCTGTGTTGGTGACTTGTCCTTACCCGATGGTCCCGGTGGCTATGCTTGCAAGAAACCATCAAAAGTAACTGCTGAT
GACTTTGTGTTCTCAGGGTTAGCTGCCACAGGAAAGATAATCCCTCTCATTAAAGCGGCGGTGACTCCTGCTTTTGCTCCTCAATTTCCAGGTGT
CAATGGGCTTGGAATCTCAATGGCTAGGCTTGATTTAGCTATAAGTGGTGTTATCCCAATGCACACACACCCCGGAGCATCGGAGGTGCTTTATG
TTGTCCAAGGAGAAATATGCGCGGGATTTATTTCTTCCTCGGACAACAAAGTGTTTTTTAAAACCCTAAAACAAGGAGATATTATGGTATTTCCA
CAAGGGTTACTGCATTTTCAGATTAATTCAGGGAAAACTTCAGCTTTGGCTATTATTTCTTTCAGTAGCCCAACACCAGGGCTTCAAATTACTGA
TTTTGCTTTGTTTGCTAATGATTTGCCTACTGAACTTGTCGCAGCCACCACATTCCTTGATGCTGCTTTAATCAAGAAGTTGAAGGGTGTTCTTG
GAGGAACCAACTAATTAATTAATTATCTTGTAAT
AAGCCGCGGTCCTCGATTTCTGTGTTGGTGACTTGTCCTTACCCGATGGTCCCGGTGGCTATGCTTGCAAGAAACCATCAAAAGTAACTGCTGAT
GACTTTGTGTTCTCAGGGTTAGCTGCCACAGGAAAGATAATCCCTCTCATTAAAGCGGCGGTGACTCCTGCTTTTGCTCCTCAATTTCCAGGTGT
CAATGGGCTTGGAATCTCAATGGCTAGGCTTGATTTAGCTATAAGTGGTGTTATCCCAATGCACACACACCCCGGAGCATCGGAGGTGCTTTATG
TTGTCCAAGGAGAAATATGCGCGGGATTTATTTCTTCCTCGGACAACAAAGTGTTTTTTAAAACCCTAAAACAAGGAGATATTATGGTATTTCCA
CAAGGGTTACTGCATTTTCAGATTAATTCAGGGAAAACTTCAGCTTTGGCTATTATTTCTTTCAGTAGCCCAACACCAGGGCTTCAAATTACTGA
TTTTGCTTTGTTTGCTAATGATTTGCCTACTGAACTTGTCGCAGCCACCACATTCCTTGATGCTGCTTTAATCAAGAAGTTGAAGGGTGTTCTTG
GAGGAACCAACTAATTAATTAATTATCTTGTAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E296478] | SGN-U580695 | Tomato 200607 | Build 2 | 122 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107428 [Download][View] | Facility Assigned ID: TMECW95TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |
Working
