EST details — SGN-C82160
| Search information |
| Request: 82160 | Match: SGN-C82160 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82160 | Clone name: cLET-1-B23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179388 is on microarray TOM1: SGN-S1-1-7.3.2.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179388 [TUS-31-K2] | Trace: SGN-T185226 | EST: SGN-E373784 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179388 [TUS-31-K2] | Trace: SGN-T185227 | EST: SGN-E373785 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292377 | Length: 685 bp (861 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292377 [] (trimmed)
TTCCATTGCAATGGCTTCTCTCCTCAACACTGTGCCATCTATTAAACTATCAAATTTCAACTACAACAACCCACTTCGCTCTTCACAAATATCAT
TCTCCCTCTCTCGAAGAAGACTCGTTGTTAGAGCAACAGAGACTGAAAAAGAAGCTAAAGCAGAGGCACCAGATAAGGCACCAGCTGCTGGTGGC
TCAAGTATAAATCAGATTCTTGGAATCAAAGGAGCCAAGCAAGAAACGGACAAGTGGAAGATTCGGGTTCAGCTTACAAAACCTGTTACTTGGCC
TCCCCTTATCTGGGGTGTGGTCTGTGGAGCTGCTGCTTCTGGGAACTTCCACTGGACTCCAGAGGATGTGGCCAAATCAATTGTTTGTATGTTGA
TGTCTGGTCCATTTCTAACTGGCTATACTCAGACTATTAATGATTGGTATGATAGAGAGATTGATGCTATTAACGAACCTTACCGTCCAATTCCT
TCAGGTGCGGTATCTGAACAAGAGGTCATTACTCAAATATGGGTGCTTCTTTTAGGAGGCCTTGGGTTAGCTGGTATTTTAGATGTTTGGGCAGG
GCATGACTTTCCTGTAATATTTTACCTTGCACTTGGTGGATCCTTGCTCTCCTACATCTACTCAGCTCCACCATTAAAGCTCAAACAGAACGGAT
GGATTGGAAATTTTGCTCTA
TCTCCCTCTCTCGAAGAAGACTCGTTGTTAGAGCAACAGAGACTGAAAAAGAAGCTAAAGCAGAGGCACCAGATAAGGCACCAGCTGCTGGTGGC
TCAAGTATAAATCAGATTCTTGGAATCAAAGGAGCCAAGCAAGAAACGGACAAGTGGAAGATTCGGGTTCAGCTTACAAAACCTGTTACTTGGCC
TCCCCTTATCTGGGGTGTGGTCTGTGGAGCTGCTGCTTCTGGGAACTTCCACTGGACTCCAGAGGATGTGGCCAAATCAATTGTTTGTATGTTGA
TGTCTGGTCCATTTCTAACTGGCTATACTCAGACTATTAATGATTGGTATGATAGAGAGATTGATGCTATTAACGAACCTTACCGTCCAATTCCT
TCAGGTGCGGTATCTGAACAAGAGGTCATTACTCAAATATGGGTGCTTCTTTTAGGAGGCCTTGGGTTAGCTGGTATTTTAGATGTTTGGGCAGG
GCATGACTTTCCTGTAATATTTTACCTTGCACTTGGTGGATCCTTGCTCTCCTACATCTACTCAGCTCCACCATTAAAGCTCAAACAGAACGGAT
GGATTGGAAATTTTGCTCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292377] | SGN-U573465 | Tomato 200607 | Build 2 | 33 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102651 [Download][View] | Facility Assigned ID: TMEAC12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 14.5 |
Working
