EST details — SGN-C82186
| Search information |
| Request: 82186 | Match: SGN-C82186 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82186 | Clone name: cLET-1-C8 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179404 is on microarray TOM1: SGN-S1-1-7.3.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179404 [TUS-31-K18] | Trace: SGN-T185232 | EST: SGN-E373790 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179404 [TUS-31-K18] | Trace: SGN-T185233 | EST: SGN-E373791 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292336 | Length: 599 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292336 [] (trimmed)
CGGCGGTGAGTTCGTCGGAGTTAATTTCCAGTGAGAATAGAATTGATTGAAAGAGATGACGTTGAAATTATACGTAGATCGTATGTCCCAACCTT
CTCGTGCAGTTATCATCTTCTGCAAGTTAAATGGAATAGACTTTGAGGAGATACACATAAATCTCTCCAAGCGCCAGCAGTTATCTCCTGAATTT
AAAGAAATTAATCCCATGAAGCAAGTACCAGCTATAATTGATGGAAGATTTAAGCTTTTCGAAAGTCATGCAATTCTTAGATATCTGGCTTGTGC
ATTTCCAGGAATAGCAGATCATTGGTACCCTGCTGACTTATACAAAAGAGCAAAGGTAGACTCTGTGTTGGACTGGCATCACTCAAACTTGCGTC
GCGGTGCACCTGGATATATCTTTAATACTGATCTTGCTCCTGCTTTTGGGCTGCCATTGAATCCACAAGCAGCAGCAGAAGCTGAGAAAGTCCTT
TTGGCATCTCTTGCAAAAGTCGAGTCTGTTTGGCTCCAGAGAAAACGACGGTTTTTGCTTGGGAGTGGCCAACCTTCAATTGCAGAGCTTAGCTT
AGTGTGTGAGATTATGGAACTTGAGATTT
CTCGTGCAGTTATCATCTTCTGCAAGTTAAATGGAATAGACTTTGAGGAGATACACATAAATCTCTCCAAGCGCCAGCAGTTATCTCCTGAATTT
AAAGAAATTAATCCCATGAAGCAAGTACCAGCTATAATTGATGGAAGATTTAAGCTTTTCGAAAGTCATGCAATTCTTAGATATCTGGCTTGTGC
ATTTCCAGGAATAGCAGATCATTGGTACCCTGCTGACTTATACAAAAGAGCAAAGGTAGACTCTGTGTTGGACTGGCATCACTCAAACTTGCGTC
GCGGTGCACCTGGATATATCTTTAATACTGATCTTGCTCCTGCTTTTGGGCTGCCATTGAATCCACAAGCAGCAGCAGAAGCTGAGAAAGTCCTT
TTGGCATCTCTTGCAAAAGTCGAGTCTGTTTGGCTCCAGAGAAAACGACGGTTTTTGCTTGGGAGTGGCCAACCTTCAATTGCAGAGCTTAGCTT
AGTGTGTGAGATTATGGAACTTGAGATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292336] | SGN-U573764 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102610 [Download][View] | Facility Assigned ID: TMEAB16TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0167 | Quality Trim Threshold: 14.5 |
Working
