EST details — SGN-C82221
| Search information |
| Request: 82221 | Match: SGN-C82221 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82221 | Clone name: cLET-1-E23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185273 is on microarray TOM1: SGN-S1-1-2.4.12.16
See unigene SGN-U577253 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C82221 [cLET-1-E23] | Trace: SGN-T102359 | EST: SGN-E292085 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C185273 [TUS-46-P7] | Trace: SGN-T199065 | EST: SGN-E397739 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185273 [TUS-46-P7] | Trace: SGN-T200113 | EST: SGN-E398787 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292289 | Length: 652 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292289 [] (trimmed)
CAATGGCCACTGTTACCTCTGCTGCTGTTGCTATTCCATCTTTCACTGGCCTTAAGGCTGGTGCTTCATCATCTTCCAGAGTTAGCACCGGTGCA
TCCGCTAAGGTGGCAGCTGCCCCAGTTGCCAGATTGACTGTGAAGGCGTCTTTGAAAGATGTCGGTGCTGTGGTTGCTGCCACCGCTGTTAGCGC
GATGCTTGCTAGCAATGCCATGGCACTTGAAGTGTTGCTTGGTGGTGATGATGGGAGTCTAGCTTTTATTCCTGGAAACTTCAGCGTTAGTGCTG
GTGAGAAAATTACATTCAAGAACAATGCAGGGTTCCCACACAACGTCGTATTTGATGAAGATGAAATCCCAGCTGGTGTGGATGCTAGTAAGATT
TCCATGTCTGAAGAGGATCTTCTGAATGCAGCAGGAGAGACATACAGTGTCACTTTGAGTGAGAAAGGAACTTACACTTTCTACTGTGCACCTCA
CCAGGGAGCTGGAATGGTTGGCAAAGTTACTGTCAACTAATTTTTTTCACACCTCTGTTTTGTAAAAGTTGATTTGAGTTCCCATCAATTTCAAC
ATTTTCCTTTTAGTATTGCCCTTCTCTTTTTGAGGTGTAATGAAAACTCAAGAAATTAAAGTTGCATATGTATCCATGTAAT
TCCGCTAAGGTGGCAGCTGCCCCAGTTGCCAGATTGACTGTGAAGGCGTCTTTGAAAGATGTCGGTGCTGTGGTTGCTGCCACCGCTGTTAGCGC
GATGCTTGCTAGCAATGCCATGGCACTTGAAGTGTTGCTTGGTGGTGATGATGGGAGTCTAGCTTTTATTCCTGGAAACTTCAGCGTTAGTGCTG
GTGAGAAAATTACATTCAAGAACAATGCAGGGTTCCCACACAACGTCGTATTTGATGAAGATGAAATCCCAGCTGGTGTGGATGCTAGTAAGATT
TCCATGTCTGAAGAGGATCTTCTGAATGCAGCAGGAGAGACATACAGTGTCACTTTGAGTGAGAAAGGAACTTACACTTTCTACTGTGCACCTCA
CCAGGGAGCTGGAATGGTTGGCAAAGTTACTGTCAACTAATTTTTTTCACACCTCTGTTTTGTAAAAGTTGATTTGAGTTCCCATCAATTTCAAC
ATTTTCCTTTTAGTATTGCCCTTCTCTTTTTGAGGTGTAATGAAAACTCAAGAAATTAAAGTTGCATATGTATCCATGTAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292289] | SGN-U577253 | Tomato 200607 | Build 2 | 198 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102563 [Download][View] | Facility Assigned ID: TMEAA36THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 12.5 |
Working
