EST details — SGN-C82239
| Search information |
| Request: 82239 | Match: SGN-C82239 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82239 | Clone name: cLET-1-F2 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179436 is on microarray TOM1: SGN-S1-1-7.1.2.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179436 [TUS-31-M2] | Trace: SGN-T185327 | EST: SGN-E373885 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179436 [TUS-31-M2] | Trace: SGN-T185328 | EST: SGN-E373886 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292229 | Length: 631 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292229 [] (trimmed)
GCAAAACCCTAGAAACTGAACAATGACAACAGTTCCAGGGCAATTAGTGTGGGAAATTGTGAAGAAGAACAATGCATTTTTGGTAAAGGAGTTCG
GTAATGGTTCCGCAGGCGTTGTGTTTAGCAAAGAGCCTAACAATCTTTGCAATCTTCACTCTTACAAGCACTCTGGCCTAGCAAACAAGAAAACT
GTAACTATCCAGGTTGGAGGCAAAGATCAATCTGTGTTGCTTGCTACAACAAAGACCAAGAAACAGAACAAGCCTTCAACTTTGCTGAACAAATC
TGCAATGAAGAAGGAGTTCCGTCGCATGGCCAAGGCAGTAACAAACCAGGTTGCAGACAACTATTACAGGCCAGATCTGAAGAAAGCAGCCCTTG
CAAGGTTGAGTGCCGTGAACAGAAGCCTCAAGGTTGCCAAGTCTGGCGTGAAGAAGAGGAACAGGCAGGCTTAGAGTTGCATTGTGTTTGCAATG
ACATTGTTGTTCCCTTGTCATTAAGTAACAAAGTTTTGATTTTCGATTTTATAGTTGAATTCTTTTTTCCAAAAGCTATTGGTAAGGGGCCTTGC
CCCGTGCTTTTTCGGATTGAAGACTTTATGATCATTTAGAAAGGATCTGTTTAATTTGTGG
GTAATGGTTCCGCAGGCGTTGTGTTTAGCAAAGAGCCTAACAATCTTTGCAATCTTCACTCTTACAAGCACTCTGGCCTAGCAAACAAGAAAACT
GTAACTATCCAGGTTGGAGGCAAAGATCAATCTGTGTTGCTTGCTACAACAAAGACCAAGAAACAGAACAAGCCTTCAACTTTGCTGAACAAATC
TGCAATGAAGAAGGAGTTCCGTCGCATGGCCAAGGCAGTAACAAACCAGGTTGCAGACAACTATTACAGGCCAGATCTGAAGAAAGCAGCCCTTG
CAAGGTTGAGTGCCGTGAACAGAAGCCTCAAGGTTGCCAAGTCTGGCGTGAAGAAGAGGAACAGGCAGGCTTAGAGTTGCATTGTGTTTGCAATG
ACATTGTTGTTCCCTTGTCATTAAGTAACAAAGTTTTGATTTTCGATTTTATAGTTGAATTCTTTTTTCCAAAAGCTATTGGTAAGGGGCCTTGC
CCCGTGCTTTTTCGGATTGAAGACTTTATGATCATTTAGAAAGGATCTGTTTAATTTGTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292229] | SGN-U578829 | Tomato 200607 | Build 2 | 58 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102503 [Download][View] | Facility Assigned ID: TMEAD25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0172 | Quality Trim Threshold: 12.5 |
Working
