EST details — SGN-C82241
| Search information |
| Request: 82241 | Match: SGN-C82241 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82241 | Clone name: cLET-1-F22 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179438 is on microarray TOM1: SGN-S1-1-5.1.2.10
See unigene SGN-U579338 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C179438 [TUS-31-M4] | Trace: SGN-T185238 | EST: SGN-E373796 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179438 [TUS-31-M4] | Trace: SGN-T185239 | EST: SGN-E373797 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292233 | Length: 573 bp (897 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292233 [] (trimmed)
CCACAGCAAACACAGAGAAGTTCATAGCAGAAGAAGAGAGAGATTTAGCTATGTCTGATGAAGAACACCATTTTGAGTCCAAAGCTGATGCTGGT
GCCTCAAAAACTTACCCTCAACAAGCTGGTACTATTCGCAAGAATGGTTATATAGTTATCAAAGGCAGACCTTGCAAGGTTGTTGAGGTCTCCAC
TTCCAAAACTGGCAAGCATGGACATGCAAAATGTCACTTTGTGGCAATCGACATTTTCAATGCAAAAAAGCTTGAAGATATTGTTCCTTCATCCC
ACAATTGTGATGTGCCACATGTCAATCGTACTGACTATCAGCTGATTGACATATCTGAAGATGGTTTTGTGTCTCTTCTTACTGAAAATGGAAAC
ACCAAAGACGACCTCAGACTTCCCACCGATGACACCCTGTTGAACCAGGTTAAAGGTGGATTTGAGGAAGGAAAGGATCTCGTTCTGTCTGTGAT
GTCTGCAATGGGTGAAGAGCAGATCTGTGCTGTGAAGGACATTGGTACCAAGACCTAGTTGTGTGCATTCTGCAGCATAAATAATTGCTTTTTAG
CGA
GCCTCAAAAACTTACCCTCAACAAGCTGGTACTATTCGCAAGAATGGTTATATAGTTATCAAAGGCAGACCTTGCAAGGTTGTTGAGGTCTCCAC
TTCCAAAACTGGCAAGCATGGACATGCAAAATGTCACTTTGTGGCAATCGACATTTTCAATGCAAAAAAGCTTGAAGATATTGTTCCTTCATCCC
ACAATTGTGATGTGCCACATGTCAATCGTACTGACTATCAGCTGATTGACATATCTGAAGATGGTTTTGTGTCTCTTCTTACTGAAAATGGAAAC
ACCAAAGACGACCTCAGACTTCCCACCGATGACACCCTGTTGAACCAGGTTAAAGGTGGATTTGAGGAAGGAAAGGATCTCGTTCTGTCTGTGAT
GTCTGCAATGGGTGAAGAGCAGATCTGTGCTGTGAAGGACATTGGTACCAAGACCTAGTTGTGTGCATTCTGCAGCATAAATAATTGCTTTTTAG
CGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292233] | SGN-U579338 | Tomato 200607 | Build 2 | 131 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102507 [Download][View] | Facility Assigned ID: TMEAD35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 12.5 |
Working
