EST details — SGN-C82323
| Search information |
| Request: 82323 | Match: SGN-C82323 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82323 | Clone name: cLET-1-J20 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185275 is on microarray TOM1: SGN-S1-1-8.4.12.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185275 [TUS-46-P9] | Trace: SGN-T1887 | EST: SGN-E378648 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185275 [TUS-46-P9] | Trace: SGN-T199066 | EST: SGN-E397740 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185275 [TUS-46-P9] | Trace: SGN-T199119 | EST: SGN-E397793 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292245 | Length: 532 bp (902 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292245 [] (trimmed)
CAAATGTTGTAGAAACAGTAGAATTACAAAAGCACTAAAAGATACTTGAACGGTTTTTTTTTTTACTTTAAAGAACATAGCCAATAAAGGAAAGA
GATGGCCTTATTTTCTAGCAGTTTCAGCAAAATGGAAAGGGGAAGGTTTAGACAAGAACATTCTGCTTCATCAGAAGCCCTATTCGCGACGATGA
TGTAGTAATCGAAGGACAAAAAGTTCAAGGCTCCACAGTCATGTTCTCTGCTTCTCGTCTGACAGTTTCGAAGAGCACAGAGGAAAGATATCGCT
CCCCGAAGCTTGGGAAAACAACAACAATGAGCTTCCCAGCATTTTCAGGACGCTTAGCAACTTTAATTGCCGCAGCAGCAGCAGCACCAGATGAT
ATTCCCACTAGCAATCCTTCCTTCAATGCCAGAAGCTTAGCCATTTCTATGGATTCATCACTTGAAACCTGAACTACATCGTCAATAAGGTTAAC
TTCCAAAACACCAGGAACGAAACCAGCACCAATCCCCTGAATCTTATGTGGACCAGG
GATGGCCTTATTTTCTAGCAGTTTCAGCAAAATGGAAAGGGGAAGGTTTAGACAAGAACATTCTGCTTCATCAGAAGCCCTATTCGCGACGATGA
TGTAGTAATCGAAGGACAAAAAGTTCAAGGCTCCACAGTCATGTTCTCTGCTTCTCGTCTGACAGTTTCGAAGAGCACAGAGGAAAGATATCGCT
CCCCGAAGCTTGGGAAAACAACAACAATGAGCTTCCCAGCATTTTCAGGACGCTTAGCAACTTTAATTGCCGCAGCAGCAGCAGCACCAGATGAT
ATTCCCACTAGCAATCCTTCCTTCAATGCCAGAAGCTTAGCCATTTCTATGGATTCATCACTTGAAACCTGAACTACATCGTCAATAAGGTTAAC
TTCCAAAACACCAGGAACGAAACCAGCACCAATCCCCTGAATCTTATGTGGACCAGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292245] | SGN-U585413 | Tomato 200607 | Build 2 | 74 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102519 [Download][View] | Facility Assigned ID: TMEAD58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 12.5 |
Working
