EST details — SGN-C82327
| Search information |
| Request: 82327 | Match: SGN-C82327 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82327 | Clone name: cLET-1-J3 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179501 is on microarray TOM1: SGN-S1-1-6.3.2.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179501 [TUS-31-O19] | Trace: SGN-T185167 | EST: SGN-E372710 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179501 [TUS-31-O19] | Trace: SGN-T185168 | EST: SGN-E372711 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292398 | Length: 572 bp (862 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292398 [] (trimmed)
GTGCTGTTAGGTGAAAAAAAAAGAAAGAGAGAGCTCACAAAAATGGCGATGAGAACAGTATGTGTAACAGGAGCTTCAGGCTACATAGCTTCATG
GCTAGTCAAATTTTTGCTTCAGCGTGGTTATACTGTTAAAGCTACTGTTCGCGATCTCAATGATGAAAAAAAGGTAGATCACTTGACATCCCTGG
ATGGAGCTAAGGAGAGACTCCACTTGTTCAAAGCGGACCTACTGGAAGAAGGTTCCTTTGATGCTGTTGTTGAGGGGTGTGAAGGCGTGTTTCAT
ACAGCATCTCCTTTTTACCTTGGAGTCAAGGATCCACAGGTGGAGATGATTGATCCTGCACTGAAGGGGACACTTAATGTTCTTGGATCAGTTGC
AAAGACACCATCTGTTAGAAGAGTGGTCTTGACATCATCTGTTGCAGCAGTTGCTTTCAATGGCAAGCCAAGAACCCCTGAAGTGGTGGTTGATG
AAACATGGTGGTCAGATCCTGACTTTTGCAGAGAATCACAGCTCTGGTATGTGCTTTCGAAGACATTANCTGAGGATGCTGCGTGGAAGTTTGTG
AA
GCTAGTCAAATTTTTGCTTCAGCGTGGTTATACTGTTAAAGCTACTGTTCGCGATCTCAATGATGAAAAAAAGGTAGATCACTTGACATCCCTGG
ATGGAGCTAAGGAGAGACTCCACTTGTTCAAAGCGGACCTACTGGAAGAAGGTTCCTTTGATGCTGTTGTTGAGGGGTGTGAAGGCGTGTTTCAT
ACAGCATCTCCTTTTTACCTTGGAGTCAAGGATCCACAGGTGGAGATGATTGATCCTGCACTGAAGGGGACACTTAATGTTCTTGGATCAGTTGC
AAAGACACCATCTGTTAGAAGAGTGGTCTTGACATCATCTGTTGCAGCAGTTGCTTTCAATGGCAAGCCAAGAACCCCTGAAGTGGTGGTTGATG
AAACATGGTGGTCAGATCCTGACTTTTGCAGAGAATCACAGCTCTGGTATGTGCTTTCGAAGACATTANCTGAGGATGCTGCGTGGAAGTTTGTG
AA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292398] | SGN-U580430 | Tomato 200607 | Build 2 | 48 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102672 [Download][View] | Facility Assigned ID: TMEAC50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 14.5 |
Working
