EST details — SGN-C82433
| Search information |
| Request: 82433 | Match: SGN-C82433 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82433 | Clone name: cLET-1-O19 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179578 is on microarray TOM1: SGN-S1-1-1.2.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82433 [cLET-1-O19] | Trace: SGN-T102598 | EST: SGN-E292324 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C179578 [TUS-32-B24] | Trace: SGN-T186289 | EST: SGN-E372808 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179578 [TUS-32-B24] | Trace: SGN-T186290 | EST: SGN-E372809 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292147 | Length: 659 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292147 [] (trimmed)
AAAACCCTACAGCTCCCTCTTACGAAGCTTAGCTTCGAGTTTTTCTTCTCATCTTTTCGATAATGGCTTTACCAAACCAGCAAACTGTAGACTAT
CCAAGCTTCAAGCTTGTTATTGTGGGAGATGGAGGAACTGGCAAGACAACATTTGTCAAAAGGCATCTCACTGGTGAATTCGAGAAAAAATACGA
ACCCACTATTGGTGTGGAGGTTCATCCACTAGACTTCTTCACAAATTGTGGGAAGATTCGGTTTTATTGCTGGGATACAGCTGGACAAGAGAAGT
TTGGAGGTCTCAGAGATGGTTACTACATTCATGGGCAATGTGCAATTATCATGTTTGATGTTACAGCCCGTCTGACCTACAAGAATGTTCCTACA
TGGCATAGAGATCTTTGTAGGGTTTGTGAAAACATCCCCATTGTTCTCTGTGGAAACAAAGTTGATGTCAAGAACAGGCAGGTTAAGGCTAAGCA
AGTTACCTTCCACAGGAAGAAAAATTTGCAATACTATGAGATCTCAGCAAAGAGTAACTACAACTTTGAGAAGCCTTTTCTGTACCTTGCCAGAA
AGCTTGCTGGGGATGGTAATCTTCACTTTGTGGAGTCACCTGCACTTGCTCCCCCAGAAGTACACATCGACTTANCTGCACAGGCACTG
CCAAGCTTCAAGCTTGTTATTGTGGGAGATGGAGGAACTGGCAAGACAACATTTGTCAAAAGGCATCTCACTGGTGAATTCGAGAAAAAATACGA
ACCCACTATTGGTGTGGAGGTTCATCCACTAGACTTCTTCACAAATTGTGGGAAGATTCGGTTTTATTGCTGGGATACAGCTGGACAAGAGAAGT
TTGGAGGTCTCAGAGATGGTTACTACATTCATGGGCAATGTGCAATTATCATGTTTGATGTTACAGCCCGTCTGACCTACAAGAATGTTCCTACA
TGGCATAGAGATCTTTGTAGGGTTTGTGAAAACATCCCCATTGTTCTCTGTGGAAACAAAGTTGATGTCAAGAACAGGCAGGTTAAGGCTAAGCA
AGTTACCTTCCACAGGAAGAAAAATTTGCAATACTATGAGATCTCAGCAAAGAGTAACTACAACTTTGAGAAGCCTTTTCTGTACCTTGCCAGAA
AGCTTGCTGGGGATGGTAATCTTCACTTTGTGGAGTCACCTGCACTTGCTCCCCCAGAAGTACACATCGACTTANCTGCACAGGCACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292147] | SGN-U580136 | Tomato 200607 | Build 2 | 82 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102421 [Download][View] | Facility Assigned ID: TMEAA94THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
