EST details — SGN-C82452
| Search information |
| Request: 82452 | Match: SGN-C82452 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82452 | Clone name: cLET-1-P18 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179591 is on microarray TOM1: SGN-S1-1-4.3.1.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E292458 | Length: 445 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E292458 [] (trimmed)
AAAAGCAGAAGGGGTGCNCCTCCACTATGACTATCATTATTCTCTCTTGAAAAAAGAAATTTTCATTAATTTTTCTTTAATTCACGGATATTTTT
CAGCTATGGAGTTAGGTGACAACAAGATTTTGAATGTGGGGTTGCTTTTAGTTGCAACCCTTTTGGTAGCAAAGCTCATATCTGCACTAATTATG
CCCAGATCTAAGAAACGTTTGCCTCCAGTGGTTAAAGCATGGCCTATTGTTGGTGGGTTGATCCGTTTTCTTAAAGGGCCAGTTGTGATGCTTAG
ACAGGAGTATCCAAAGCTTGGGAGTGTGTTTACTCTGAATTTGTTGAACAAGAACATCACATTCTTCATTGGTCCAGAAGTTTCTGCACATTTTT
TCAAAGCCCCAGAAACAGATCTTAGCCAACAAGAGGTTTATCAGTTCAATGTGCCTACCTTTGGA
CAGCTATGGAGTTAGGTGACAACAAGATTTTGAATGTGGGGTTGCTTTTAGTTGCAACCCTTTTGGTAGCAAAGCTCATATCTGCACTAATTATG
CCCAGATCTAAGAAACGTTTGCCTCCAGTGGTTAAAGCATGGCCTATTGTTGGTGGGTTGATCCGTTTTCTTAAAGGGCCAGTTGTGATGCTTAG
ACAGGAGTATCCAAAGCTTGGGAGTGTGTTTACTCTGAATTTGTTGAACAAGAACATCACATTCTTCATTGGTCCAGAAGTTTCTGCACATTTTT
TCAAAGCCCCAGAAACAGATCTTAGCCAACAAGAGGTTTATCAGTTCAATGTGCCTACCTTTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292458] | SGN-U583117 | Tomato 200607 | Build 2 | 82 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102732 [Download][View] | Facility Assigned ID: TMEAD93TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0179 | Quality Trim Threshold: 14.5 |


