EST details — SGN-C82955
| Search information |
| Request: 82955 | Match: SGN-C82955 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82955 | Clone name: cLET-22-J3 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184594 is on microarray TOM1: SGN-S1-1-1.3.14.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184594 [TUS-45-C24] | Trace: SGN-T196543 | EST: SGN-E395217 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184594 [TUS-45-C24] | Trace: SGN-T198611 | EST: SGN-E397285 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294588 | Length: 544 bp (952 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294588 [] (trimmed)
CAACTTTGACAACGATCCTCTCACCGGAGATACGAGCAATTATGGCTGCGACGAGATTTCAACCGTCCATTTTTCTCCTCTGCAGTTTGGTCGTG
ATCGGAACCCTAGCTCTTGCTCAGGCCAAATCCCAGGAAAATCTGAAAGAAGTTACTCACAAAGTTTACTTTGATGTTGAGATAGACGGTAAACC
TGCCGGTCGTATTGTTATGGGTCTCTTTGGTAAAACAGTTCCTAAAACAGCAGAGAACTTCAGAGCATTGTGCACAGGGGAAAAGGGAGTTGGAA
AGAGTGGCAAGCCTCTTCATTTCAAGGGGAGCAAATTCCACCGAATAATCCCCAGCTTCATGATTCAAGGTGGTGATTTCACCCTTGGTGATGGG
CGTGGAGGGGAATCTATTTACGGTGAAAAGTTTGCGGATGAAAATTTCAAGATCAAGCACACTGGACCTGGGCTATTGTCAATGGCAAATGCTGG
TTCTGACACCAATGGTTCACAATTCTTCATCACAACAGTCACAACTACATGGTTGGATGGTCGACATGT
ATCGGAACCCTAGCTCTTGCTCAGGCCAAATCCCAGGAAAATCTGAAAGAAGTTACTCACAAAGTTTACTTTGATGTTGAGATAGACGGTAAACC
TGCCGGTCGTATTGTTATGGGTCTCTTTGGTAAAACAGTTCCTAAAACAGCAGAGAACTTCAGAGCATTGTGCACAGGGGAAAAGGGAGTTGGAA
AGAGTGGCAAGCCTCTTCATTTCAAGGGGAGCAAATTCCACCGAATAATCCCCAGCTTCATGATTCAAGGTGGTGATTTCACCCTTGGTGATGGG
CGTGGAGGGGAATCTATTTACGGTGAAAAGTTTGCGGATGAAAATTTCAAGATCAAGCACACTGGACCTGGGCTATTGTCAATGGCAAATGCTGG
TTCTGACACCAATGGTTCACAATTCTTCATCACAACAGTCACAACTACATGGTTGGATGGTCGACATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294588] | SGN-U579013 | Tomato 200607 | Build 2 | 55 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107974 [Download][View] | Facility Assigned ID: TMEDI50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
