EST details — SGN-C83278
| Search information |
| Request: 83278 | Match: SGN-C83278 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C83278 | Clone name: cLET-23-P5 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184636 is on microarray TOM1: SGN-S1-1-7.1.14.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184636 [TUS-45-E18] | Trace: SGN-T198614 | EST: SGN-E397288 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184636 [TUS-45-E18] | Trace: SGN-T199740 | EST: SGN-E398414 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E295563 | Length: 590 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E295563 [] (trimmed)
TCAGAATCTTCCCAGATCCTCTGGTTTACCACTGAGAAGTTTCACAGGCAACTCAAGAAAGCTTTATTCCACTGTTGTTTCACTGGGGATGACAA
AATTTGCTGATCAGCGTCTAAGTATTGTGGCACAGGTTGTATCTGGTCCAGAATCTACTACAGAGAAGGATGAGGAAAAATCCGATACATACAGT
CATGACATGACTGCAGCTATGGGAGCTGTCTTGACTTATAGGCATGAGTTAGGAATGAACTACAACTTCATCCGTCCAGATTTGATTGTTGGGTC
ATGTCTACAGACTCCTGAGGACGTGGACAAGCTTCGGAGCATTGGAGTAAAAACTATATTTTGCTTGCAACAAAATCCAGATCTTGAATACTTTG
GGGTTGATATCAATGCTATTCGTGAATACGCCAACAAATGTGGTGCTATTGAACACTTGCGTGCCGAAATAAGGGATTTTGATGCATTTGATTTG
AGGTTGCGGCTTCCAGCTGTAATAAGCATATTGAACAAAGCCATCAATAGAAATGGAGGTGTGACTTACATACACTGCACAGCTGGACTTGGCAG
AGCTCCCGCAGTTGCGTTGA
AATTTGCTGATCAGCGTCTAAGTATTGTGGCACAGGTTGTATCTGGTCCAGAATCTACTACAGAGAAGGATGAGGAAAAATCCGATACATACAGT
CATGACATGACTGCAGCTATGGGAGCTGTCTTGACTTATAGGCATGAGTTAGGAATGAACTACAACTTCATCCGTCCAGATTTGATTGTTGGGTC
ATGTCTACAGACTCCTGAGGACGTGGACAAGCTTCGGAGCATTGGAGTAAAAACTATATTTTGCTTGCAACAAAATCCAGATCTTGAATACTTTG
GGGTTGATATCAATGCTATTCGTGAATACGCCAACAAATGTGGTGCTATTGAACACTTGCGTGCCGAAATAAGGGATTTTGATGCATTTGATTTG
AGGTTGCGGCTTCCAGCTGTAATAAGCATATTGAACAAAGCCATCAATAGAAATGGAGGTGTGACTTACATACACTGCACAGCTGGACTTGGCAG
AGCTCCCGCAGTTGCGTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E295563] | SGN-U578949 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T108288 [Download][View] | Facility Assigned ID: TMEDM87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
